Tableau information
Concept source: d2pf4a_ amino acid (a.a.) range (PHE141)(SER203)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PHE141) (ARG157) H1
(SER159) (ASP176) H2
(PRO179) (LYS194) H3
(GLU197) (SER203) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -149.8° H2
H3 -8.8° -143.5° H3
H4 -144.1° -23.6° -143.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4btoa_ : (ASN115) (PRO176) [view usage] : a.135.1.1 |Tetraspanin |Tetraspanin |Tetraspanin |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4dvha1 : (SER21) (ILE86) [view usage] : a.2.11.0 |Long alpha-hairpin |Fe,Mn superoxide dismutase (SOD), N-terminal domain |automated matches |automated matches |Trypanosoma cruzi [TaxId: 353153]
d1x3zb_ : (THR258) (VAL309) [view usage] : a.189.1.1 |XPC-binding domain |XPC-binding domain |XPC-binding domain |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3o55a_ : (ASP22) (GLY106) [view usage] : a.24.15.1 |Four-helical up-and-down bundle |FAD-dependent thiol oxidase |FAD-dependent thiol oxidase |Augmenter of liver regeneration |Human (Homo sapiens) [TaxId: 9606]
d1te4a_ : (GLU52) (HIS111) [view usage] : a.118.1.16 |alpha-alpha superhelix |ARM repeat |PBS lyase HEAT-like repeat |MTH187 |Methanobacterium thermoautotrophicum [TaxId: 145262]
d3u2ma_ : (ASP98) (GLY182) [view usage] : a.24.15.1 |Four-helical up-and-down bundle |FAD-dependent thiol oxidase |FAD-dependent thiol oxidase |Augmenter of liver regeneration |Human (Homo sapiens) [TaxId: 9606]
d2nppb1 : (GLN151) (PHE225) [view usage] : a.118.1.20 |alpha-alpha superhelix |ARM repeat |B56-like |Serine/threonine-protein phosphatase 2A regulatory subunit B56-gamma |Human (Homo sapiens) [TaxId: 9606]
d1w63a_ : (ALA526) (GLU582) [view usage] : i.23.1.1 |clathrin assemblies |clathrin assemblies |clathrin assemblies |AP1 clathrin adaptor core |Mouse (Mus musculus) [TaxId: 10090]
d3mbga_ : (ASP98) (GLY182) [view usage] : a.24.15.1 |Four-helical up-and-down bundle |FAD-dependent thiol oxidase |FAD-dependent thiol oxidase |Augmenter of liver regeneration |Human (Homo sapiens) [TaxId: 9606]
d1oqcb_ : (ASP18) (GLY102) [view usage] : a.24.15.1 |Four-helical up-and-down bundle |FAD-dependent thiol oxidase |FAD-dependent thiol oxidase |Augmenter of liver regeneration |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4drib_ : (GLU2022) (SER2112) [view usage] : a.24.7.1 |Four-helical up-and-down bundle |FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3h5qa1 : (SER-2) (SER65) [view usage] : a.46.2.0 |Methionine synthase domain-like |Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
d4e0ic_ : (ASP86) (LEU169) [view usage] : a.24.15.0 |Four-helical up-and-down bundle |FAD-dependent thiol oxidase |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
d2gtqa4 : (SER542) (GLY613) [view usage] : a.118.1.27 |alpha-alpha superhelix |ARM repeat |Aminopeptidase N (APN) C-terminal-like |Aminopeptidase N (APN) C-terminal domain |Neisseria meningitidis [TaxId: 122586]
d4pu2a4 : (SER542) (GLY613) [view usage] : a.118.1.27 |alpha-alpha superhelix |ARM repeat |Aminopeptidase N (APN) C-terminal-like |Aminopeptidase N (APN) C-terminal domain |Neisseria meningitidis [TaxId: 122586]
d1brwa1 : (MET3) (SER65) [view usage] : a.46.2.1 |Methionine synthase domain-like |Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |Pyrimidine nucleoside phosphorylase |Bacillus stearothermophilus [TaxId: 1422]
d2wk5d1 : (LEU36) (GLN97) [view usage] : a.46.2.0 |Methionine synthase domain-like |Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2wk5a1 : (GLN35) (SER98) [view usage] : a.46.2.0 |Methionine synthase domain-like |Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1g1eb_ : (PRO301) (PRO381) [view usage] : a.59.1.1 |PAH2 domain |PAH2 domain |PAH2 domain |Sin3A |Mouse (Mus musculus) [TaxId: 10090]
d1gxba1 : (ILE3) (ALA66) [view usage] : a.46.2.1 |Methionine synthase domain-like |Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |Anthranilate phosphoribosyltransferase (TrpD) |Sulfolobus solfataricus [TaxId: 2287]
d3nd2a_ : (PRO497) (PRO588) [view usage] : a.118.1.1 |alpha-alpha superhelix |ARM repeat |Armadillo repeat |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2nylb1 : (GLN151) (PHE225) [view usage] : a.118.1.20 |alpha-alpha superhelix |ARM repeat |B56-like |Serine/threonine-protein phosphatase 2A regulatory subunit B56-gamma |Human (Homo sapiens) [TaxId: 9606]
d3gbrb1 : (ILE3) (ALA66) [view usage] : a.46.2.1 |Methionine synthase domain-like |Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |Anthranilate phosphoribosyltransferase (TrpD) |Sulfolobus solfataricus [TaxId: 2287]
d3tk0a_ : (ASP98) (GLY182) [view usage] : a.24.15.1 |Four-helical up-and-down bundle |FAD-dependent thiol oxidase |FAD-dependent thiol oxidase |Augmenter of liver regeneration |Human (Homo sapiens) [TaxId: 9606]
d1hnib_ : (PRO247) (GLU312) [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
d2wk6a1 : (LEU36) (SER98) [view usage] : a.46.2.0 |Methionine synthase domain-like |Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1x3wb1 : (THR258) (VAL309) [view usage] : a.189.1.1 |XPC-binding domain |XPC-binding domain |XPC-binding domain |Rad23 STI1 domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4p6sa_ : (ARG206) (HIS245) [view usage] : a.86.1.0 |Di-copper centre-containing domain |Di-copper centre-containing domain |automated matches |automated matches |Bacillus megaterium [TaxId: 1404]
d3esfa1 : (SER21) (SER82) [view usage] : a.2.11.0 |Long alpha-hairpin |Fe,Mn superoxide dismutase (SOD), N-terminal domain |automated matches |automated matches |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
d1azya1 : (LEU3) (SER66) [view usage] : a.46.2.1 |Methionine synthase domain-like |Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |Thymidine phosphorylase |Escherichia coli [TaxId: 562]
d1e91a_ : (VAL5) (LEU80) [view usage] : a.59.1.1 |PAH2 domain |PAH2 domain |PAH2 domain |Sin3B |Mouse (Mus musculus) [TaxId: 10090]
d1uoua1 : (LEU36) (GLN100) [view usage] : a.46.2.1 |Methionine synthase domain-like |Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |Thymidine phosphorylase |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, a.118, a.86, i.23, a.24, a.2, a.189, a.46, a.135, a.59