Tableau information
Concept source: d10gsa1 amino acid (a.a.) range (ASP116)(ARG186)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP116) (ASN136) H1
(SER149) (LEU165) H2
(GLY168) (PHE173) H3
(PHE173) (ARG186) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -148.0° H2
H3 -39.2° 125.1° H3
H4 76.3° -109.6° -115.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1r71b_ : (GLU139) (ASP193) [view usage] : a.4.14.1 |DNA/RNA-binding 3-helical bundle |KorB DNA-binding domain-like |KorB DNA-binding domain-like |Transcriptional repressor protein KorB DNA-binding domain |Escherichia coli [TaxId: 562]
d1gssa1 : (PHE127) (ALA183) [view usage] : a.45.1.1 |GST C-terminal domain-like |GST C-terminal domain-like |Glutathione S-transferase (GST), C-terminal domain |Class pi GST |Human (Homo sapiens) [TaxId: 9606]
d2e22a1 : (ASP318) (ASP377) [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |automated matches |Bacillus sp. [TaxId: 84635]
d2yjya_ : (ARG831) (ALA873) [view usage] : a.118.1.8 |alpha-alpha superhelix |ARM repeat |Pumilio repeat |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1a7va_ : (VAL4) (LYS75) [view usage] : a.24.3.2 |Four-helical up-and-down bundle |Cytochromes |Cytochrome c'-like |Cytochrome c' |Rhodopseudomonas palustris [TaxId: 1076]
d1vqrc_ : (LYS223) (LEU281) [view usage] : a.211.1.3 |HD-domain/PDEase-like |HD-domain/PDEase-like |modified HD domain |Hypothetical protein Cj0248 |Campylobacter jejuni [TaxId: 197]
d1ljra1 : (PRO128) (LEU201) [view usage] : a.45.1.1 |GST C-terminal domain-like |GST C-terminal domain-like |Glutathione S-transferase (GST), C-terminal domain |Class theta GST |Human (Homo sapiens) [TaxId: 9606]
d3ie3a2 : (LEU122) (ARG186) [view usage] : a.45.1.1 |GST C-terminal domain-like |GST C-terminal domain-like |Glutathione S-transferase (GST), C-terminal domain |Class pi GST |Human (Homo sapiens) [TaxId: 9606]
d1vfga1 : (LEU297) (PRO351) [view usage] : a.173.1.1 |Poly A polymerase C-terminal region-like |Poly A polymerase C-terminal region-like |Poly A polymerase C-terminal region-like |Poly A polymerase PcnB |Aquifex aeolicus [TaxId: 63363]
d1seda_ : (SER39) (PHE112) [view usage] : a.219.1.1 |Hypothetical protein YhaI |Hypothetical protein YhaI |Hypothetical protein YhaI |Hypothetical protein YhaI |Bacillus subtilis [TaxId: 1423]
d1px7a1 : (LEU122) (ARG186) [view usage] : a.45.1.1 |GST C-terminal domain-like |GST C-terminal domain-like |Glutathione S-transferase (GST), C-terminal domain |Class pi GST |Human (Homo sapiens) [TaxId: 9606]
d2jdqa_ : (THR84) (ARG137) [view usage] : a.118.1.0 |alpha-alpha superhelix |ARM repeat |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4reqa1 : (LYS507) (GLY557) [view usage] : c.1.19.1 |TIM beta/alpha-barrel |Cobalamin (vitamin B12)-dependent enzymes |Methylmalonyl-CoA mutase, N-terminal (CoA-binding) domain |Methylmalonyl-CoA mutase alpha subunit, domain 1 |Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
d2yjyb_ : (ARG831) (ALA873) [view usage] : a.118.1.8 |alpha-alpha superhelix |ARM repeat |Pumilio repeat |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4cxab2 : (PRO160) (THR226) [view usage] : a.74.1.1 |Cyclin-like |Cyclin-like |Cyclin |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2c3qa2 : (SER129) (ALA201) [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1q80a_ : (SER112) (PHE169) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Sarcoplasmic calcium-binding protein |Sandworm (Nereis diversicolor) [TaxId: 126592]
d4nhfc_ : (GLU95) (SER151) [view usage] : d.17.4.0 |Cystatin-like |NTF2-like |automated matches |automated matches |Bartonella grahamii [TaxId: 634504]
d3qb5b_ : (MET1) (GLU109) [view usage] : a.118.16.1 |alpha-alpha superhelix |Translin |Translin |automated matches |Human (Homo sapiens) [TaxId: 9606]
d6gpba_ : (PRO488) (LYS554) [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Glycogen phosphorylase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d1f3aa1 : (LEU132) (LEU190) [view usage] : a.45.1.1 |GST C-terminal domain-like |GST C-terminal domain-like |Glutathione S-transferase (GST), C-terminal domain |Class alpha GST |Mouse (Mus musculus), (a1-1) [TaxId: 10090]
d2ouxa1 : (GLU6) (LEU57) [view usage] : a.118.26.1 |alpha-alpha superhelix |MgtE N-terminal domain-like |MgtE N-terminal domain-like |Magnesium transporter MgtE |Enterococcus faecalis [TaxId: 1351]
d2ouxa1 : (SER58) (LEU107) [view usage] : a.118.26.1 |alpha-alpha superhelix |MgtE N-terminal domain-like |MgtE N-terminal domain-like |Magnesium transporter MgtE |Enterococcus faecalis [TaxId: 1351]
d1z9ha1 : (VAL303) (GLU372) [view usage] : a.45.1.1 |GST C-terminal domain-like |GST C-terminal domain-like |Glutathione S-transferase (GST), C-terminal domain |Microsomal prostaglandin E synthase-2 |Crab-eating macaque (Macaca fascicularis) [TaxId: 9541]
d1kkta_ : (ALA81) (LEU145) [view usage] : a.102.2.1 |alpha/alpha toroid |Seven-hairpin glycosidases |Class I alpha-1;2-mannosidase, catalytic domain |Class I alpha-1;2-mannosidase, catalytic domain |Fungus (Penicillium citrinum) [TaxId: 5077]
d1ynsa_ : (VAL39) (GLY125) [view usage] : c.108.1.22 |HAD-like |HAD-like |Enolase-phosphatase E1 |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1fjgr_ : (LYS21) (GLY77) [view usage] : a.4.8.1 |DNA/RNA-binding 3-helical bundle |Ribosomal protein S18 |Ribosomal protein S18 |Ribosomal protein S18 |Thermus thermophilus [TaxId: 274]
d3bsba_ : (SER830) (ALA873) [view usage] : a.118.1.8 |alpha-alpha superhelix |ARM repeat |Pumilio repeat |Pumilio 1 |Human (Homo sapiens) [TaxId: 9606]
d3nb6a_ : (HIS74) (LEU126) [view usage] : d.2.1.10 |Lysozyme-like |Lysozyme-like |PBP transglycosylase domain-like |automated matches |Aquifex aeolicus [TaxId: 63363]
d1hnwd_ : (SER52) (GLY109) [view usage] : d.66.1.2 |Alpha-L RNA-binding motif |Alpha-L RNA-binding motif |Ribosomal protein S4 (bacteria) |Ribosomal protein S4 |Thermus thermophilus [TaxId: 274]
d2wo5b_ : (MET213) (GLU295) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Escherichia coli [TaxId: 469008]
d2pf4b_ : (GLY396) (VAL452) [view usage] : a.118.1.2 |alpha-alpha superhelix |ARM repeat |HEAT repeat |Constant regulatory domain of protein phosphatase 2a, pr65alpha |Mouse (Mus musculus) [TaxId: 10090]
d2oy9b_ : (SER14) (ARG81) [view usage] : a.276.1.1 |BH2638-like |BH2638-like |BH2638-like |Uncharacterized protein BH2638 |Bacillus halodurans [TaxId: 86665]
d1tela1 : (HIS1388) (GLN1428) [view usage] : c.1.14.1 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |RuBisCo, large subunit, C-terminal domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Chlorobium tepidum [TaxId: 1097]
d1r71d_ : (GLU139) (ASP193) [view usage] : a.4.14.1 |DNA/RNA-binding 3-helical bundle |KorB DNA-binding domain-like |KorB DNA-binding domain-like |Transcriptional repressor protein KorB DNA-binding domain |Escherichia coli [TaxId: 562]
d1bc9a_ : (MET60) (LEU116) [view usage] : a.118.3.1 |alpha-alpha superhelix |Sec7 domain |Sec7 domain |Cytohesin-1/b2-1 |Human (Homo sapiens) [TaxId: 9606]
d2yvxa1 : (LYS41) (GLU87) [view usage] : a.118.26.1 |alpha-alpha superhelix |MgtE N-terminal domain-like |MgtE N-terminal domain-like |Magnesium transporter MgtE |Thermus thermophilus [TaxId: 274]
d1jswc_ : (PHE47) (LYS140) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |L-aspartate ammonia lyase |Escherichia coli [TaxId: 562]
d2l4ha_ : (ARG125) (LYS188) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1na3a_ : (SER3) (GLY52) [view usage] : k.38.1.1 |TPR domain-based design |TPR domain-based design |TPR domain-based design |Designed protein cTPR2 |Synthetic
d1rqga1 : (THR549) (ARG600) [view usage] : a.27.1.1 |Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |Methionyl-tRNA synthetase (MetRS) |Pyrococcus abyssi [TaxId: 29292]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, a.118, c.108, a.102, a.127, a.211, d.2, c.87, d.17, k.38, a.4, a.39, a.45, a.74, a.24, a.27, d.66, a.173, a.219, a.276