Tableau information
Concept source: d1qrvb_ amino acid (a.a.) range (SER10)(PHE70)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER10) (ALA19) H1
(GLU21) (ASN27) H2
(LYS31) (MET46) H3
(SER50) (PHE70) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 54.6° H2
H3 114.9° 110.1° H3
H4 117.7° -134.5° -112.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3weka_ : (PHE103) (LEU158) [view usage] : a.128.1.2 |Terpenoid synthases |Terpenoid synthases |Squalene synthase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2evua_ : (SER3) (GLY78) [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Methanothermobacter marburgensis [TaxId: 79929]
d1ag2a_ : (GLN172) (TYR226) [view usage] : d.6.1.1 |Prion-like |Prion-like |Prion-like |Prion protein domain |Mouse (Mus musculus) [TaxId: 10090]
d2yqia_ : (SER15) (LYS78) [view usage] : a.21.1.1 |HMG-box |HMG-box |HMG-box |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1t43a_ : (TYR3) (PHE42) [view usage] : c.66.1.30 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |N5-glutamine methyltransferase, HemK |N5-glutamine methyltransferase, HemK |Escherichia coli [TaxId: 562]
d1b1ba2 : (THR65) (VAL119) [view usage] : a.76.1.1 |Iron-dependent repressor protein, dimerization domain |Iron-dependent repressor protein, dimerization domain |Iron-dependent repressor protein, dimerization domain |Iron-dependent regulator |Mycobacterium tuberculosis [TaxId: 1773]
d1e7ja_ : (SER10) (GLY74) [view usage] : a.21.1.1 |HMG-box |HMG-box |HMG-box |HMG-D |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d2isia_ : (GLU216) (TYR257) [view usage] : d.151.1.1 |DNase I-like |DNase I-like |DNase I-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2oqtd_ : (ASP107) (GLU155) [view usage] : d.112.1.0 |Phoshotransferase/anion transport protein |Phoshotransferase/anion transport protein |automated matches |automated matches |Streptococcus pyogenes [TaxId: 301447]
d1gaka_ : (GLY41) (GLN110) [view usage] : a.19.1.1 |Fertilization protein |Fertilization protein |Fertilization protein |SP18 |Green abalone (Haliotis fulgens) [TaxId: 6456]
d3nm9a_ : (SER10) (GLY74) [view usage] : a.21.1.1 |HMG-box |HMG-box |HMG-box |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1ddna2 : (THR65) (VAL119) [view usage] : a.76.1.1 |Iron-dependent repressor protein, dimerization domain |Iron-dependent repressor protein, dimerization domain |Iron-dependent repressor protein, dimerization domain |Diphtheria toxin repressor (DtxR) |Corynebacterium diphtheriae [TaxId: 1717]
d1kbhb_ : (ASP59) (ASN101) [view usage] : a.153.1.1 |Nuclear receptor coactivator interlocking domain |Nuclear receptor coactivator interlocking domain |Nuclear receptor coactivator interlocking domain |Nuclear receptor coactivator CBP/p300 ibid domain |Mouse (Mus musculus) [TaxId: 10090]
d1qrvb_ : (SER10) (PHE70) [view usage] : a.21.1.1 |HMG-box |HMG-box |HMG-box |HMG-D |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d3wc9b_ : (PHE103) (PHE157) [view usage] : a.128.1.2 |Terpenoid synthases |Terpenoid synthases |Squalene synthase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3l4db_ : (GLU185) (GLY266) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Leishmania infantum [TaxId: 5671]
d1i5da_ : (ASP455) (THR493) [view usage] : d.122.1.3 |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |Histidine kinase |Histidine kinase CheA |Thermotoga maritima [TaxId: 2336]
d1yt3a3 : (THR103) (GLN191) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Ribonuclease D, catalytic domain |Escherichia coli [TaxId: 562]
d3hy9b_ : (ALA404) (LEU475) [view usage] : d.92.1.0 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1itwc_ : (LYS625) (ASN694) [view usage] : c.77.1.2 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Monomeric isocitrate dehydrogenase |Monomeric isocitrate dehydrogenase |Azotobacter vinelandii [TaxId: 354]
d1cfja_ : (SER237) (PRO283) [view usage] : c.69.1.1 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Acetylcholinesterase-like |Acetylcholinesterase |Pacific electric ray (Torpedo californica) [TaxId: 7787]
d3weia_ : (PHE103) (LEU158) [view usage] : a.128.1.2 |Terpenoid synthases |Terpenoid synthases |Squalene synthase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3q2za_ : (ASN99) (HIS161) [view usage] : a.128.1.2 |Terpenoid synthases |Terpenoid synthases |Squalene synthase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1gk3a_ : (SER458) (LEU501) [view usage] : a.127.1.2 |L-aspartase-like |L-aspartase-like |HAL/PAL-like |Histidine ammonia-lyase (HAL) |Pseudomonas putida [TaxId: 303]
d2gzka1 : (SER94) (ALA158) [view usage] : a.21.1.1 |HMG-box |HMG-box |HMG-box |High mobility group protein 1, HMG1 |Chinese hamster (Cricetulus griseus) [TaxId: 10029]
d3c1vb_ : (LEU42) (GLY92) [view usage] : a.39.1.2 |EF Hand-like |EF-hand |S100 proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4m85c_ : (ASP9) (PHE53) [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Staphylococcus aureus [TaxId: 158878]
d2f4ma1 : (HIS392) (SER443) [view usage] : d.3.1.4 |Cysteine proteinases |Cysteine proteinases |Transglutaminase core |Peptide:N-glycanase 1, PNG1 |Mouse (Mus musculus) [TaxId: 10090]
d1e3qa_ : (SER237) (PRO283) [view usage] : c.69.1.1 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Acetylcholinesterase-like |Acetylcholinesterase |Pacific electric ray (Torpedo californica) [TaxId: 7787]
d1hmaa_ : (SER10) (ALA72) [view usage] : a.21.1.1 |HMG-box |HMG-box |HMG-box |HMG-D |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1hsma_ : (PHE13) (PRO53) [view usage] : a.21.1.1 |HMG-box |HMG-box |HMG-box |High mobility group protein 1, HMG1 |Chinese hamster (Cricetulus griseus) [TaxId: 10029]
d2hdza_ : (ARG10) (SER69) [view usage] : a.21.1.1 |HMG-box |HMG-box |HMG-box |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1uehb_ : (GLY146) (LEU186) [view usage] : c.101.1.1 |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Undecaprenyl diphosphate synthase |Escherichia coli [TaxId: 562]
d2p51a_ : (ASP204) (GLN267) [view usage] : c.55.3.0 |Ribonuclease H-like motif |Ribonuclease H-like |automated matches |automated matches |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.69, a.104, a.128, c.66, d.92, c.77, a.127, d.122, c.55, d.151, d.3, d.108, c.101, a.39, f.19, d.6, d.112, a.21, a.19, a.76,
a.153