Protein Concepts Dictionary

Tableau information

Concept source:  d3pr0b_  amino acid (a.a.) range (ARG34)(ASN108)

nSSEs in this Concept: 4

String of secondary struct.elems. (SSEs) defining this concept: HHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ARG34)   (ASN66) H1
	   (SER71)   (LEU77) H2
	   (LEU79)   (GLY89) H3
	   (SER92)  (ASN108) H4

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                          
H2      121.0°   H2                   
H3       58.3° -117.3°   H3            
H4     -132.4°  -87.3° -144.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1pbua_ :   (ASP278)  (SER320)   [view usage] : d.58.46.1 |Ferredoxin-like |eEF1-gamma domain |eEF1-gamma domain |Elongation factor 1-gamma C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
 d4lacb_ :   (LEU218)  (MET263)   [view usage] : a.268.1.1 |PTPA-like |PTPA-like |PTPA-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2ixma1 :   (LEU218)  (MET263)   [view usage] : a.268.1.1 |PTPA-like |PTPA-like |PTPA-like |Serine/threonine-protein phosphatase 2A regulatory subunit B', PTPA |Human (Homo sapiens) [TaxId: 9606]
 d1mt5a_ :    (ALA37)  (GLU106)   [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Fatty acid amide hydrolase (oleamide hydrolase) |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2wapa_ :    (ARG34)  (THR111)   [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3pr0b_ :    (ARG34)  (ASN108)   [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4lw4c_ :   (THR103)  (GLN146)   [view usage] : d.224.1.1 |SufE/NifU |SufE/NifU |SufE-like |automated matches |Escherichia coli [TaxId: 714962]
 d2wj1b_ :    (ARG34)  (ASN108)   [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2vyaa_ :    (GLN35)  (THR111)   [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3oj8b_ :    (GLN35)  (ASN112)   [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3oj8a_ :    (GLN35)  (ASN108)   [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3k7fa_ :    (GLN35)  (ASN108)   [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4do3a_ :    (ARG34)  (ASN112)   [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3qj8b_ :    (ARG34)  (ASN108)   [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2vyab_ :    (GLN35)  (ASN108)   [view usage] : c.117.1.1 |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |Amidase signature (AS) enzymes |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.58,   c.117,   d.224,   a.268