Tableau information
Concept source: d3k1sh_ amino acid (a.a.) range (THR3)(ALA104)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR3) (LEU14) H1
(ASN15) (GLY33) H2
(MSE35) (ARG65) H3
(VAL73) (ALA104) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -12.3° H2
H3 -156.0° -157.8° H3
H4 28.5° 16.2° -152.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1qjbb_ : (GLN161) (SER230) [view usage] : a.118.7.1 |alpha-alpha superhelix |14-3-3 protein |14-3-3 protein |zeta isoform |Human (Homo sapiens) [TaxId: 9606]
d3k5la2 : (LEU423) (THR505) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |automated matches |Escherichia coli [TaxId: 562]
d3m3ma2 : (GLU84) (GLY173) [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 220664]
d4dnkb_ : (GLN163) (GLU233) [view usage] : a.118.7.1 |alpha-alpha superhelix |14-3-3 protein |14-3-3 protein |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1d8db_ : (GLY249) (GLY319) [view usage] : a.102.4.3 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Protein prenyltransferases |Protein farnesyltransferase, beta-subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1wrda1 : (GLN216) (ARG305) [view usage] : a.7.8.1 |Spectrin repeat-like |GAT-like domain |GAT domain |Target of Myb protein 1, TOM1 |Human (Homo sapiens) [TaxId: 9606]
d3n20a_ : (PRO87) (ALA158) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouA |Pseudomonas sp. [TaxId: 320855]
d2o8pa1 : (ILE167) (LYS227) [view usage] : a.118.7.1 |alpha-alpha superhelix |14-3-3 protein |14-3-3 protein |14-3-3 domain containing protein cgd7_2470 |Cryptosporidium parvum [TaxId: 5807]
d1oa0a_ : (PRO28) (LEU102) [view usage] : e.26.1.1 |Prismane protein-like |Prismane protein-like |Hybrid cluster protein (prismane protein) |Hybrid cluster protein (prismane protein) |Desulfovibrio desulfuricans [TaxId: 876]
d3wkga_ : (ASP8) (HIS97) [view usage] : a.102.1.0 |alpha/alpha toroid |Six-hairpin glycosidases |automated matches |automated matches |Rhodothermus marinus [TaxId: 29549]
d3wkga_ : (TRP322) (ARG410) [view usage] : a.102.1.0 |alpha/alpha toroid |Six-hairpin glycosidases |automated matches |automated matches |Rhodothermus marinus [TaxId: 29549]
d3wkfa_ : (TRP322) (VAL409) [view usage] : a.102.1.0 |alpha/alpha toroid |Six-hairpin glycosidases |automated matches |automated matches |Rhodothermus marinus [TaxId: 29549]
d3k1sh_ : (THR3) (ALA104) [view usage] : a.7.2.0 |Spectrin repeat-like |Enzyme IIa from lactose specific PTS, IIa-lac |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d2nyla1 : (LYS475) (THR518) [view usage] : a.118.1.2 |alpha-alpha superhelix |ARM repeat |HEAT repeat |Constant regulatory domain of protein phosphatase 2a, pr65alpha |Human (Homo sapiens) [TaxId: 9606]
d1c82a1 : (GLY347) (LEU419) [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |Hyaluronate lyase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d1bs2a1 : (PRO522) (GLY600) [view usage] : a.27.1.1 |Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |Arginyl-tRNA synthetase (ArgRS) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1kkta_ : (GLN149) (LYS231) [view usage] : a.102.2.1 |alpha/alpha toroid |Seven-hairpin glycosidases |Class I alpha-1;2-mannosidase, catalytic domain |Class I alpha-1;2-mannosidase, catalytic domain |Fungus (Penicillium citrinum) [TaxId: 5077]
d1b3ua_ : (LYS474) (LYS518) [view usage] : a.118.1.2 |alpha-alpha superhelix |ARM repeat |HEAT repeat |Constant regulatory domain of protein phosphatase 2a, pr65alpha |Human (Homo sapiens) [TaxId: 9606]
d1hf8a1 : (THR161) (GLY258) [view usage] : a.7.8.2 |Spectrin repeat-like |GAT-like domain |Phosphoinositide-binding clathrin adaptor, domain 2 |Clathrin assembly lymphoid myeloid leukaemia protein, Calm |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2bbja1 : (ASP193) (ASN285) [view usage] : d.328.1.1 |CorA soluble domain-like |CorA soluble domain-like |CorA soluble domain-like |Magnesium transport protein CorA, soluble domain |Thermotoga maritima [TaxId: 2336]
d1ld7b_ : (GLY749) (GLY819) [view usage] : a.102.4.3 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Protein prenyltransferases |Protein farnesyltransferase, beta-subunit |Human (Homo sapiens) [TaxId: 9606]
d1fppb_ : (GLY249) (GLY319) [view usage] : a.102.4.3 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Protein prenyltransferases |Protein farnesyltransferase, beta-subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1quua1 : (GLU5) (LEU124) [view usage] : a.7.1.1 |Spectrin repeat-like |Spectrin repeat |Spectrin repeat |alpha-actinin |Human (Homo sapiens) [TaxId: 9606]
d1wr6d_ : (LEU218) (GLY299) [view usage] : a.7.8.1 |Spectrin repeat-like |GAT-like domain |GAT domain |ADP-ribosylation factor binding protein Gga3 |Human (Homo sapiens) [TaxId: 9606]
d1t72g_ : (VAL121) (GLU213) [view usage] : a.7.12.1 |Spectrin repeat-like |PhoU-like |PhoU-like |Phosphate transport system protein PhoU |Aquifex aeolicus [TaxId: 63363]
d1hcub_ : (GLY55) (GLY118) [view usage] : a.102.2.1 |alpha/alpha toroid |Seven-hairpin glycosidases |Class I alpha-1;2-mannosidase, catalytic domain |Class I alpha-1;2-mannosidase, catalytic domain |Trichoderma reesei [TaxId: 51453]
d1rj1a_ : (LYS67) (LEU147) [view usage] : a.29.6.1 |Bromodomain-like |Plant invertase/pectin methylesterase inhibitor |Plant invertase/pectin methylesterase inhibitor |Invertase inhibitor |Tobacco (Nicotiana tabacum) [TaxId: 4097]
d1gnla_ : (PRO28) (LEU102) [view usage] : e.26.1.1 |Prismane protein-like |Prismane protein-like |Hybrid cluster protein (prismane protein) |Hybrid cluster protein (prismane protein) |Desulfovibrio desulfuricans [TaxId: 876]
d2zirb_ : (GLY249) (GLY319) [view usage] : a.102.4.3 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Protein prenyltransferases |Protein farnesyltransferase, beta-subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4gkfb_ : (GLU103) (ALA156) [view usage] : a.70.2.0 |ATPD N-terminal domain-like |AF1862-like |automated matches |automated matches |Pyrococcus furiosus [TaxId: 186497]
d3uapa2 : (THR88) (GLY164) [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |Methylococcus capsulatus [TaxId: 243233]
d1hcia2 : (GLU397) (LEU510) [view usage] : a.7.1.1 |Spectrin repeat-like |Spectrin repeat |Spectrin repeat |alpha-actinin |Human (Homo sapiens) [TaxId: 9606]
d2z8yo_ : (VAL19) (TYR118) [view usage] : e.26.1.3 |Prismane protein-like |Prismane protein-like |Acetyl-CoA synthase |automated matches |Moorella thermoacetica [TaxId: 1525]
d1i1ip_ : (SER30) (ARG116) [view usage] : d.92.1.5 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neurolysin-like |Neurolysin (endopeptidase 24.16, thimet oligopeptidase) |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4gtob_ : (GLY249) (GLY319) [view usage] : a.102.4.3 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Protein prenyltransferases |Protein farnesyltransferase, beta-subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3n1ya_ : (PRO87) (ALA158) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouA |Pseudomonas sp. [TaxId: 320855]
d4dnka_ : (GLN163) (GLU233) [view usage] : a.118.7.1 |alpha-alpha superhelix |14-3-3 protein |14-3-3 protein |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2a5yb2 : (PRO23) (ALA65) [view usage] : a.77.1.3 |DEATH domain |DEATH domain |Caspase recruitment domain, CARD |Cell death protein 4, CED-4 |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d1h3na1 : (GLY716) (PHE780) [view usage] : a.27.1.1 |Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |Leucyl-tRNA synthetase (LeuRS) |Thermus thermophilus [TaxId: 274]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, a.118, a.102, d.92, a.25, d.328, e.26, a.45, a.29, a.77, a.27, a.7, a.70