Tableau information
Concept source: d1x90a_ amino acid (a.a.) range (PRO14)(LEU146)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO14) (GLY59) H1
(ASP61) (GLY92) H2
(GLY94) (LEU118) H3
(ASP122) (LEU146) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -158.4° H2
H3 30.8° -165.5° H3
H4 -157.6° 24.4° -159.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.9° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2l9sb_ : (VAL302) (SER385) [view usage] : a.59.1.1 |PAH2 domain |PAH2 domain |PAH2 domain |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3c63a_ : (ASP2) (TYR105) [view usage] : a.24.3.1 |Four-helical up-and-down bundle |Cytochromes |Cytochrome b562 |automated matches |Escherichia coli [TaxId: 562]
d2rldc_ : (LYS6) (THR116) [view usage] : a.29.16.1 |Bromodomain-like |IVS-encoded protein-like |IVS-encoded protein-like |Uncharacterized protein BT0352 |Bacteroides thetaiotaomicron [TaxId: 818]
d2g3ka1 : (ALA150) (LEU241) [view usage] : a.24.28.1 |Four-helical up-and-down bundle |VPS28 C-terminal domain-like |VPS28 C-terminal domain-like |Vacuolar protein sorting-associated protein 28, VPS28 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2qzgb_ : (SER8) (GLU87) [view usage] : a.29.14.1 |Bromodomain-like |Ta0600-like |Ta0600-like |Uncharacterized protein MMP1188 |Methanococcus maripaludis [TaxId: 39152]
d1x91a_ : (ASN29) (LEU146) [view usage] : a.29.6.1 |Bromodomain-like |Plant invertase/pectin methylesterase inhibitor |Plant invertase/pectin methylesterase inhibitor |Pectin methylesterase inhibitor 1, PMEI1 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d2m9xa_ : (LYS13) (SER108) [view usage] : a.29.10.1 |Bromodomain-like |MAST3 pre-PK domain-like |MAST3 pre-PK domain-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ggqb_ : (ASN41) (ALA158) [view usage] : a.24.12.1 |Four-helical up-and-down bundle |Outer surface protein C (OspC) |Outer surface protein C (OspC) |Outer surface protein C (OspC) |Lyme disease spirochete (Borrelia burgdorferi), different strains [TaxId: 139]
d1k40a_ : (LYS923) (LYS1044) [view usage] : a.24.14.1 |Four-helical up-and-down bundle |FAT domain of focal adhesion kinase |FAT domain of focal adhesion kinase |FAT domain of focal adhesion kinase |Mouse (Mus musculus) [TaxId: 10090]
d2rldb_ : (LYS6) (THR116) [view usage] : a.29.16.1 |Bromodomain-like |IVS-encoded protein-like |IVS-encoded protein-like |Uncharacterized protein BT0352 |Bacteroides thetaiotaomicron [TaxId: 818]
d3d19d1 : (VAL17) (GLY142) [view usage] : a.29.13.1 |Bromodomain-like |Bacillus cereus metalloprotein-like |Bacillus cereus metalloprotein-like |Uncharacterized protein BCE_G9241_1042 |Bacillus cereus [TaxId: 1396]
d2qsba1 : (ARG3) (LEU85) [view usage] : a.29.14.1 |Bromodomain-like |Ta0600-like |Ta0600-like |Uncharacterized protein Ta0600 |Thermoplasma acidophilum [TaxId: 2303]
d1k05c_ : (ASP922) (LEU1046) [view usage] : a.24.14.1 |Four-helical up-and-down bundle |FAT domain of focal adhesion kinase |FAT domain of focal adhesion kinase |FAT domain of focal adhesion kinase |Human (Homo sapiens) [TaxId: 9606]
d1sj8a2 : (PHE664) (GLU780) [view usage] : a.216.1.1 |I/LWEQ domain |I/LWEQ domain |I/LWEQ domain |Talin 1 |Mouse (Mus musculus) [TaxId: 10090]
d2qzgc_ : (SER8) (THR88) [view usage] : a.29.14.1 |Bromodomain-like |Ta0600-like |Ta0600-like |Uncharacterized protein MMP1188 |Methanococcus maripaludis [TaxId: 39152]
d3us6a_ : (GLU40) (GLY144) [view usage] : a.24.10.0 |Four-helical up-and-down bundle |Histidine-containing phosphotransfer domain, HPT domain |automated matches |automated matches |Medicago truncatula [TaxId: 3880]
d1m57a_ : (LEU227) (TRP371) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Bacterial aa3 type cytochrome c oxidase subunit I |Rhodobacter sphaeroides [TaxId: 1063]
d1k05b_ : (ASP922) (GLY1047) [view usage] : a.24.14.1 |Four-helical up-and-down bundle |FAT domain of focal adhesion kinase |FAT domain of focal adhesion kinase |FAT domain of focal adhesion kinase |Human (Homo sapiens) [TaxId: 9606]
d2rmra_ : (VAL123) (LEU186) [view usage] : a.59.1.1 |PAH2 domain |PAH2 domain |PAH2 domain |Sin3A |Mouse (Mus musculus) [TaxId: 10090]
d3d19a1 : (VAL20) (ASN140) [view usage] : a.29.13.1 |Bromodomain-like |Bacillus cereus metalloprotein-like |Bacillus cereus metalloprotein-like |Uncharacterized protein BCE_G9241_1042 |Bacillus cereus [TaxId: 1396]
d1pv3a_ : (LYS924) (GLN1049) [view usage] : a.24.14.1 |Four-helical up-and-down bundle |FAT domain of focal adhesion kinase |FAT domain of focal adhesion kinase |FAT domain of focal adhesion kinase |Chicken (Gallus gallus) [TaxId: 9031]
d2qlaa_ : (ASP2) (TYR105) [view usage] : a.24.3.1 |Four-helical up-and-down bundle |Cytochromes |Cytochrome b562 |automated matches |Escherichia coli [TaxId: 562]
d1tqga_ : (SER1) (SER104) [view usage] : a.24.10.3 |Four-helical up-and-down bundle |Histidine-containing phosphotransfer domain, HPT domain |Chemotaxis protein CheA P1 domain |Chemotaxis protein CheA P1 domain |Thermotoga maritima [TaxId: 2336]
d4eukb_ : (ASP40) (GLY144) [view usage] : a.24.10.0 |Four-helical up-and-down bundle |Histidine-containing phosphotransfer domain, HPT domain |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1uaza_ : (THR95) (ILE197) [view usage] : f.13.1.1 |Family A G protein-coupled receptor-like |Family A G protein-coupled receptor-like |Bacteriorhodopsin-like |Archaerhodopsin-1 |Halobacterium sp. [TaxId: 2243]
d4er9a_ : (ALA23) (ALA113) [view usage] : a.24.3.1 |Four-helical up-and-down bundle |Cytochromes |Cytochrome b562 |automated matches |Salmonella enterica [TaxId: 90371]
d1rj4b_ : (ASP31) (LEU147) [view usage] : a.29.6.1 |Bromodomain-like |Plant invertase/pectin methylesterase inhibitor |Plant invertase/pectin methylesterase inhibitor |Invertase inhibitor |Tobacco (Nicotiana tabacum) [TaxId: 4097]
d1sj7a1 : (ASP525) (LEU652) [view usage] : a.215.1.1 |A middle domain of Talin 1 |A middle domain of Talin 1 |A middle domain of Talin 1 |A middle domain of Talin 1 |Mouse (Mus musculus) [TaxId: 10090]
d1qlec_ : (PRO137) (GLY272) [view usage] : f.25.1.1 |Cytochrome c oxidase subunit III-like |Cytochrome c oxidase subunit III-like |Cytochrome c oxidase subunit III-like |Bacterial aa3 type cytochrome c oxidase subunit III |Paracoccus denitrificans [TaxId: 266]
d1x90a_ : (PRO14) (LEU146) [view usage] : a.29.6.1 |Bromodomain-like |Plant invertase/pectin methylesterase inhibitor |Plant invertase/pectin methylesterase inhibitor |Pectin methylesterase inhibitor 1, PMEI1 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1ktma_ : (ARG920) (SER1050) [view usage] : a.24.14.1 |Four-helical up-and-down bundle |FAT domain of focal adhesion kinase |FAT domain of focal adhesion kinase |FAT domain of focal adhesion kinase |Chicken (Gallus gallus) [TaxId: 9031]
d1h6ga2 : (ILE508) (LEU630) [view usage] : a.24.9.1 |Four-helical up-and-down bundle |alpha-catenin/vinculin-like |alpha-catenin/vinculin |alpha-catenin |Human (Homo sapiens) [TaxId: 9606]
d2npua_ : (LEU2022) (SER2112) [view usage] : a.24.7.1 |Four-helical up-and-down bundle |FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1y8pa1 : (PRO68) (GLY173) [view usage] : a.29.5.1 |Bromodomain-like |alpha-ketoacid dehydrogenase kinase, N-terminal domain |alpha-ketoacid dehydrogenase kinase, N-terminal domain |Pyruvate dehydrogenase kinase |Human (Homo sapiens) [TaxId: 9606]
d1wdya_ : (ALA205) (GLU260) [view usage] : d.211.1.1 |beta-hairpin-alpha-hairpin repeat |Ankyrin repeat |Ankyrin repeat |RNase L, 2-5a-dependent ribonuclease |Human (Homo sapiens) [TaxId: 9606]
d3c7ya_ : (LYS85) (LYS135) [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]
d2qzga1 : (SER8) (THR88) [view usage] : a.29.14.1 |Bromodomain-like |Ta0600-like |Ta0600-like |Uncharacterized protein MMP1188 |Methanococcus maripaludis [TaxId: 39152]
d3k1ib_ : (PRO20) (ILE120) [view usage] : a.24.19.0 |Four-helical up-and-down bundle |Flagellar export chaperone FliS |automated matches |automated matches |Helicobacter pylori [TaxId: 85962]
d1st6a2 : (PHE126) (LEU250) [view usage] : a.24.9.1 |Four-helical up-and-down bundle |alpha-catenin/vinculin-like |alpha-catenin/vinculin |Vinculin |Chicken (Gallus gallus) [TaxId: 9031]
d3c62a_ : (ASP2) (TYR105) [view usage] : a.24.3.1 |Four-helical up-and-down bundle |Cytochromes |Cytochrome b562 |automated matches |Escherichia coli [TaxId: 562]
d1ow8b_ : (ARG919) (GLY1047) [view usage] : a.24.14.1 |Four-helical up-and-down bundle |FAT domain of focal adhesion kinase |FAT domain of focal adhesion kinase |FAT domain of focal adhesion kinase |Human (Homo sapiens) [TaxId: 9606]
d4jeba_ : (LEU3) (TYR105) [view usage] : a.24.3.1 |Four-helical up-and-down bundle |Cytochromes |Cytochrome b562 |automated matches |Escherichia coli [TaxId: 562]
d3k1ia_ : (PRO20) (ILE120) [view usage] : a.24.19.0 |Four-helical up-and-down bundle |Flagellar export chaperone FliS |automated matches |automated matches |Helicobacter pylori [TaxId: 85962]
d1qkra_ : (ASP918) (ILE1048) [view usage] : a.24.9.1 |Four-helical up-and-down bundle |alpha-catenin/vinculin-like |alpha-catenin/vinculin |Vinculin |Chicken (Gallus gallus) [TaxId: 9031]
d1x8zc_ : (ASN29) (LEU146) [view usage] : a.29.6.1 |Bromodomain-like |Plant invertase/pectin methylesterase inhibitor |Plant invertase/pectin methylesterase inhibitor |Pectin methylesterase inhibitor 1, PMEI1 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1m56c_ : (ASP129) (GLN266) [view usage] : f.25.1.1 |Cytochrome c oxidase subunit III-like |Cytochrome c oxidase subunit III-like |Cytochrome c oxidase subunit III-like |Bacterial aa3 type cytochrome c oxidase subunit III |Rhodobacter sphaeroides [TaxId: 1063]
d2rldd_ : (ASP7) (ILE114) [view usage] : a.29.16.1 |Bromodomain-like |IVS-encoded protein-like |IVS-encoded protein-like |Uncharacterized protein BT0352 |Bacteroides thetaiotaomicron [TaxId: 818]
d1u89a1 : (GLY761) (ALA878) [view usage] : a.216.1.1 |I/LWEQ domain |I/LWEQ domain |I/LWEQ domain |Talin 1 |Mouse (Mus musculus) [TaxId: 10090]
d1sj7c1 : (ALA527) (GLN653) [view usage] : a.215.1.1 |A middle domain of Talin 1 |A middle domain of Talin 1 |A middle domain of Talin 1 |A middle domain of Talin 1 |Mouse (Mus musculus) [TaxId: 10090]
d3s9oa_ : (LYS923) (GLY1047) [view usage] : a.24.14.1 |Four-helical up-and-down bundle |FAT domain of focal adhesion kinase |FAT domain of focal adhesion kinase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2bc5a_ : (LEU3) (TYR105) [view usage] : a.24.3.1 |Four-helical up-and-down bundle |Cytochromes |Cytochrome b562 |automated matches |Escherichia coli [TaxId: 562]
d1td6a_ : (TYR22) (ASN100) [view usage] : a.234.1.1 |Hypothetical protein MPN330 |Hypothetical protein MPN330 |Hypothetical protein MPN330 |Hypothetical protein MPN330 |Mycoplasma pneumoniae [TaxId: 2104]
d2qzgd_ : (SER8) (ILE89) [view usage] : a.29.14.1 |Bromodomain-like |Ta0600-like |Ta0600-like |Uncharacterized protein MMP1188 |Methanococcus maripaludis [TaxId: 39152]
d3s9oc_ : (LYS923) (GLY1047) [view usage] : a.24.14.1 |Four-helical up-and-down bundle |FAT domain of focal adhesion kinase |FAT domain of focal adhesion kinase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1h6gb1 : (ASN398) (ILE505) [view usage] : a.24.9.1 |Four-helical up-and-down bundle |alpha-catenin/vinculin-like |alpha-catenin/vinculin |alpha-catenin |Human (Homo sapiens) [TaxId: 9606]
d1k05a_ : (VAL924) (GLY1047) [view usage] : a.24.14.1 |Four-helical up-and-down bundle |FAT domain of focal adhesion kinase |FAT domain of focal adhesion kinase |FAT domain of focal adhesion kinase |Human (Homo sapiens) [TaxId: 9606]
d2rlde_ : (VAL9) (THR116) [view usage] : a.29.16.1 |Bromodomain-like |IVS-encoded protein-like |IVS-encoded protein-like |Uncharacterized protein BT0352 |Bacteroides thetaiotaomicron [TaxId: 818]
d3gm3a_ : (ASP878) (ALA1004) [view usage] : a.24.14.0 |Four-helical up-and-down bundle |FAT domain of focal adhesion kinase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1st6a3 : (ASP256) (ALA371) [view usage] : a.24.9.1 |Four-helical up-and-down bundle |alpha-catenin/vinculin-like |alpha-catenin/vinculin |Vinculin |Chicken (Gallus gallus) [TaxId: 9031]
d1dowa_ : (LEU132) (ALA261) [view usage] : a.24.9.1 |Four-helical up-and-down bundle |alpha-catenin/vinculin-like |alpha-catenin/vinculin |alpha-catenin |Mouse (Mus musculus) [TaxId: 10090]
d2juaa1 : (LYS4) (ARG102) [view usage] : k.8.1.1 |Designed four-helix bundle protein |Designed four-helix bundle protein |Designed four-helix bundle protein |De novo designed protein s-824 |unidentified [TaxId: 32644]
d3gm1b_ : (LEU879) (ASN1002) [view usage] : a.24.14.0 |Four-helical up-and-down bundle |FAT domain of focal adhesion kinase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1lwga_ : (LYS85) (SER136) [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]
d2j9ua_ : (ALA150) (LEU241) [view usage] : a.24.28.1 |Four-helical up-and-down bundle |VPS28 C-terminal domain-like |VPS28 C-terminal domain-like |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2j9va_ : (ALA150) (LEU241) [view usage] : a.24.28.1 |Four-helical up-and-down bundle |VPS28 C-terminal domain-like |VPS28 C-terminal domain-like |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1x8zb_ : (ASN29) (LEU146) [view usage] : a.29.6.1 |Bromodomain-like |Plant invertase/pectin methylesterase inhibitor |Plant invertase/pectin methylesterase inhibitor |Pectin methylesterase inhibitor 1, PMEI1 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1wn0c_ : (GLY41) (GLN142) [view usage] : a.24.10.2 |Four-helical up-and-down bundle |Histidine-containing phosphotransfer domain, HPT domain |Phosphorelay protein-like |Histidine-containing phosphotransfer protein HP2 |Maize (Zea mays) [TaxId: 4577]
d3d19c1 : (MET18) (GLU141) [view usage] : a.29.13.1 |Bromodomain-like |Bacillus cereus metalloprotein-like |Bacillus cereus metalloprotein-like |Uncharacterized protein BCE_G9241_1042 |Bacillus cereus [TaxId: 1396]
d2b0ha1 : (ASP1845) (ALA1970) [view usage] : a.24.9.2 |Four-helical up-and-down bundle |alpha-catenin/vinculin-like |VBS domain |Talin 1 |Mouse (Mus musculus) [TaxId: 10090]
d4g78a_ : (SER51) (ARG143) [view usage] : a.24.10.0 |Four-helical up-and-down bundle |Histidine-containing phosphotransfer domain, HPT domain |automated matches |automated matches |Medicago truncatula [TaxId: 3880]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.2, d.211, f.24, f.13, a.29, a.24, a.216, f.25, k.8, a.234, a.59, a.215