Tableau information
Concept source: d3k75e1 amino acid (a.a.) range (LEU122)(LYS148)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU122) (ASN128) H1
(ASN128) (ASN133) H2
(ASN133) (PHE143) H3
(PHE143) (LYS148) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -83.6° H2
H3 -131.7° 123.4° H3
H4 132.0° 58.0° 66.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1rsob_ : (GLY81) (LYS135) [view usage] : a.194.1.1 |L27 domain |L27 domain |L27 domain |Peripheral plasma membrane protein cask |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1jr9a1 : (SER53) (LEU88) [view usage] : a.2.11.1 |Long alpha-hairpin |Fe,Mn superoxide dismutase (SOD), N-terminal domain |Fe,Mn superoxide dismutase (SOD), N-terminal domain |Mn superoxide dismutase (MnSOD) |Bacillus halodenitrificans [TaxId: 1482]
d1i9aa_ : (LEU144) (PHE178) [view usage] : d.113.1.2 |Nudix |Nudix |IPP isomerase-like |Isopentenyl diphosphate isomerase |Escherichia coli [TaxId: 562]
d1s7nb_ : (VAL21) (GLY65) [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Salmonella typhimurium [TaxId: 99287]
d1z9ub_ : (VAL21) (ARG64) [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Salmonella typhimurium [TaxId: 99287]
d3h1ha2 : (THR350) (TYR414) [view usage] : d.185.1.0 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d2r6ia1 : (GLN109) (LYS181) [view usage] : d.381.1.1 |ATP12-like |ATP12-like |ATP12-like |Uncharacterized protein Atu1473 |Agrobacterium tumefaciens [TaxId: 358]
d1is2a2 : (LYS549) (ALA609) [view usage] : a.29.3.2 |Bromodomain-like |Acyl-CoA dehydrogenase C-terminal domain-like |acyl-CoA oxidase C-terminal domains |Peroxisomal acyl-CoA oxidase-II, domains 3 and 4 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2j00b1 : (PHE105) (LEU155) [view usage] : c.23.15.1 |Flavodoxin-like |Ribosomal protein S2 |Ribosomal protein S2 |Ribosomal protein S2 |Thermus thermophilus [TaxId: 274]
d1ryua_ : (GLY64) (ILE108) [view usage] : a.4.3.1 |DNA/RNA-binding 3-helical bundle |ARID-like |ARID domain |SWI-SNF complex protein p270, SMARCF1 |Human (Homo sapiens) [TaxId: 9606]
d1v8ga2 : (GLY259) (ALA329) [view usage] : c.27.1.1 |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Anthranilate phosphoribosyltransferase (TrpD) |Thermus thermophilus [TaxId: 274]
d1ux4a_ : (SER1641) (GLU1765) [view usage] : a.207.1.1 |Formin homology 2 domain (FH2 domain) |Formin homology 2 domain (FH2 domain) |Formin homology 2 domain (FH2 domain) |Bni1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2l50a_ : (ASN47) (GLN100) [view usage] : a.39.1.0 |EF Hand-like |EF-hand |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2f6sa1 : (HIS2) (ALA46) [view usage] : a.265.1.1 |Fic-like |Fic-like |Fic-like |Cell filamentation protein Fic |Helicobacter pylori [TaxId: 210]
d1etpa2 : (ALA143) (LEU189) [view usage] : a.3.1.4 |Cytochrome c |Cytochrome c |Two-domain cytochrome c |Cytochrome c4 |Pseudomonas stutzeri [TaxId: 316]
d1esma_ : (GLU233) (ASN282) [view usage] : c.37.1.6 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Phosphoribulokinase/pantothenate kinase |Pantothenate kinase PanK |Escherichia coli [TaxId: 562]
d2mlfc_ : (GLU94) (PHE156) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4ctha_ : (SER227) (ASN293) [view usage] : d.92.1.4 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neutral endopeptidase (neprilysin) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3k75e1 : (LEU122) (LYS148) [view usage] : a.60.12.1 |SAM domain-like |PsbU/PolX domain-like |DNA polymerase beta-like, second domain |DNA polymerase beta |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1xd4a1 : (HIS308) (LYS363) [view usage] : a.87.1.1 |DBL homology domain (DH-domain) |DBL homology domain (DH-domain) |DBL homology domain (DH-domain) |Son of sevenless-1 (sos-1) |Human (Homo sapiens) [TaxId: 9606]
d1gh6b2 : (LEU676) (ASN716) [view usage] : a.74.1.3 |Cyclin-like |Cyclin-like |Retinoblastoma tumor suppressor domains |Retinoblastoma tumor suppressor domains |Human (Homo sapiens) [TaxId: 9606]
d1kkxa_ : (GLY50) (MET90) [view usage] : a.4.3.1 |DNA/RNA-binding 3-helical bundle |ARID-like |ARID domain |Transcription regulator Adr6 (Swi1) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2m6ya_ : (THR16) (GLY77) [view usage] : a.2.3.0 |Long alpha-hairpin |Chaperone J-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1osva_ : (ASP309) (SER389) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Bile acid receptor FXR |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3k92a2 : (PRO346) (GLY422) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d4ddja_ : (SER1) (ASN77) [view usage] : a.64.1.1 |Saposin-like |Saposin |NKL-like |Saposin C |Human (Homo sapiens) [TaxId: 9606]
d1c7va_ : (GLU87) (ILE151) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calcium vector protein |Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]
d1j2ma_ : (SER64) (LYS99) [view usage] : a.165.1.1 |Myosin phosphatase inhibitor 17kDa protein, CPI-17 |Myosin phosphatase inhibitor 17kDa protein, CPI-17 |Myosin phosphatase inhibitor 17kDa protein, CPI-17 |Myosin phosphatase inhibitor 17kDa protein, CPI-17 |Pig (Sus scrofa) [TaxId: 9823]
d4k8va2 : (LEU445) (LEU507) [view usage] : a.160.1.6 |PAP/OAS1 substrate-binding domain |PAP/OAS1 substrate-binding domain |cGAMP synthase, cGAS C-terminal domain |cGAMP synthase, cGAS C-terminal domain |Mouse (Mus musculus) [TaxId: 10090]
d1w2la_ : (ASP53) (GLN98) [view usage] : a.3.1.0 |Cytochrome c |Cytochrome c |automated matches |automated matches |Rhodothermus marinus [TaxId: 29549]
d1bpba1 : (GLU123) (LYS148) [view usage] : a.60.12.1 |SAM domain-like |PsbU/PolX domain-like |DNA polymerase beta-like, second domain |DNA polymerase beta |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1bpda2 : (LEU122) (LYS148) [view usage] : a.60.12.1 |SAM domain-like |PsbU/PolX domain-like |DNA polymerase beta-like, second domain |DNA polymerase beta |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1x83b_ : (LEU144) (THR179) [view usage] : d.113.1.2 |Nudix |Nudix |IPP isomerase-like |Isopentenyl diphosphate isomerase |Escherichia coli [TaxId: 562]
d1dmta_ : (SER227) (ASN293) [view usage] : d.92.1.4 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neutral endopeptidase (neprilysin) |Neutral endopeptidase (neprilysin) |Human (Homo sapiens) [TaxId: 9606]
d2dy4d2 : (VAL470) (ASN572) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |Family B DNA polymerase |Bacteriophage RB69 [TaxId: 12353]
d1dbha1 : (HIS308) (LYS363) [view usage] : a.87.1.1 |DBL homology domain (DH-domain) |DBL homology domain (DH-domain) |DBL homology domain (DH-domain) |Son of sevenless-1 (sos-1) |Human (Homo sapiens) [TaxId: 9606]
d4oy7a_ : (TYR46) (ASP86) [view usage] : b.1.18.0 |Immunoglobulin-like beta-sandwich |E set domains |automated matches |automated matches |Streptomyces coelicolor [TaxId: 100226]
d2m28a_ : (VAL204) (GLY271) [view usage] : a.39.1.0 |EF Hand-like |EF-hand |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d4gtob_ : (GLU76) (GLN134) [view usage] : a.102.4.3 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Protein prenyltransferases |Protein farnesyltransferase, beta-subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2okub_ : (VAL445) (GLN506) [view usage] : a.48.5.1 |N-cbl like |PG0775 C-terminal domain-like |PG0775 C-terminal domain-like |Uncharacterized protein PG0775 |Porphyromonas gingivalis [TaxId: 837]
d1xxhe1 : (ALA241) (GLN324) [view usage] : a.80.1.1 |post-AAA+ oligomerization domain-like |post-AAA+ oligomerization domain-like |DNA polymerase III clamp loader subunits, C-terminal domain |delta prime subunit |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, c.2, a.102, d.92, c.23, c.37, d.185, b.1, a.123, d.108, a.4, a.39, a.3, a.29, a.74, a.160, d.113, a.87, c.27, a.265,
a.60, a.80, a.64, a.2, a.48, a.194, d.381, a.207, a.165