Tableau information
Concept source: d3hkpa_ amino acid (a.a.) range (SER30)(ARG95)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER30) (GLY53) H1
(THR55) (GLY73) H2
(GLU74) (ILE83) H3
(GLU84) (ARG95) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 131.9° H2
H3 79.5° -117.4° H3
H4 129.8° -73.3° -51.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3hhxa_ : (SER30) (ARG95) [view usage] : b.3.6.0 |Prealbumin-like |Aromatic compound dioxygenase |automated matches |automated matches |Rhodococcus opacus [TaxId: 37919]
d1i6ma_ : (GLY266) (GLY323) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |Tryptophanyl-tRNA synthetase (TrpRS) |Bacillus stearothermophilus [TaxId: 1422]
d1nr5a_ : (HIS230) (ILE273) [view usage] : e.22.1.1 |Dehydroquinate synthase-like |Dehydroquinate synthase-like |Dehydroquinate synthase, DHQS |Dehydroquinate synthase, DHQS |Emericella nidulans (Aspergillus nidulans) [TaxId: 162425]
d2v4ma_ : (ARG514) (LEU552) [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2axtb1 : (PRO4) (GLY59) [view usage] : f.55.1.1 |Photosystem II antenna protein-like |Photosystem II antenna protein-like |Photosystem II antenna protein-like |Photosystem II core light harvesting protein PsbB |Thermosynechococcus elongatus [TaxId: 146786]
d4h0oa2 : (THR239) (ARG283) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Entamoeba (Entamoeba histolytica) [TaxId: 5759]
d3puha1 : (PRO212) (LEU247) [view usage] : c.69.1.21 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |PepX catalytic domain-like |automated matches |Rhodococcus sp. [TaxId: 104109]
d1o9kb_ : (PHE721) (SER773) [view usage] : a.74.1.3 |Cyclin-like |Cyclin-like |Retinoblastoma tumor suppressor domains |Retinoblastoma tumor suppressor domains |Human (Homo sapiens) [TaxId: 9606]
d1h0na_ : (ASP113) (GLU153) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Ribonucleotide reductase R2 |Mouse (Mus musculus) [TaxId: 10090]
d3fpqa_ : (ASP180) (CYS237) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Protein kinase wnk1 |Human (Homo sapiens) [TaxId: 9606]
d3t8xc1 : (LYS51) (GLN89) [view usage] : d.19.1.1 |MHC antigen-recognition domain |MHC antigen-recognition domain |MHC antigen-recognition domain |CD1, alpha-1 and alpha-2 domains |Human (Homo sapiens), CD1b [TaxId: 9606]
d3d31c1 : (GLY79) (GLU128) [view usage] : f.58.1.1 |MetI-like |MetI-like |MetI-like |Sulfate/molybdate ABC transporter, permease protein |Methanosarcina acetivorans [TaxId: 2214]
d2ot3a_ : (ASN343) (SER386) [view usage] : a.222.1.1 |VPS9 domain |VPS9 domain |VPS9 domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3hkpa_ : (SER30) (ARG95) [view usage] : b.3.6.0 |Prealbumin-like |Aromatic compound dioxygenase |automated matches |automated matches |Rhodococcus opacus [TaxId: 37919]
d1bvba_ : (LYS9) (LYS47) [view usage] : a.138.1.3 |Multiheme cytochromes |Multiheme cytochromes |Di-heme elbow motif |Cytochrome c554 |Nitrosomonas europaea [TaxId: 915]
d4p08a1 : (PRO212) (LEU247) [view usage] : c.69.1.21 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |PepX catalytic domain-like |automated matches |Rhodococcus sp. [TaxId: 104109]
d2boya_ : (SER2) (GLU65) [view usage] : b.3.6.0 |Prealbumin-like |Aromatic compound dioxygenase |automated matches |automated matches |Rhodococcus opacus [TaxId: 37919]
d2onkc1 : (PRO45) (SER120) [view usage] : f.58.1.1 |MetI-like |MetI-like |MetI-like |Molybdate/tungstate transport system permease protein WtpB (ModB) |Archaeoglobus fulgidus [TaxId: 2234]
d3l70b1 : (GLY54) (GLY93) [view usage] : d.185.1.0 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d2ee5a_ : (SER20) (GLY52) [view usage] : a.116.1.0 |GTPase activation domain, GAP |GTPase activation domain, GAP |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3aala_ : (ASP179) (LYS211) [view usage] : c.1.15.1 |TIM beta/alpha-barrel |Xylose isomerase-like |Endonuclease IV |automated matches |Geobacillus kaustophilus [TaxId: 1462]
d4lrlc_ : (THR142) (THR195) [view usage] : a.211.1.1 |HD-domain/PDEase-like |HD-domain/PDEase-like |HD domain |Hypothetical protein EF1143 |Enterococcus faecalis [TaxId: 1351]
d4i5ra_ : (SER317) (GLY342) [view usage] : c.6.1.1 |7-stranded beta/alpha barrel |Glycosyl hydrolases family 6, cellulases |Glycosyl hydrolases family 6, cellulases |automated matches |Fungus (Humicola insolens) [TaxId: 34413]
d2pv7b1 : (TYR306) (ALA371) [view usage] : a.100.1.12 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |TyrA dimerization domain-like |Prephenate dehydrogenase TyrA |Haemophilus influenzae [TaxId: 727]
d1sbpa_ : (ASP227) (TYR271) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Sulphate-binding protein |Salmonella typhimurium [TaxId: 90371]
d1txua_ : (ASN343) (SER386) [view usage] : a.222.1.1 |VPS9 domain |VPS9 domain |VPS9 domain |Rab5 GDP/GTP exchange factor (Rabex-5) |Human (Homo sapiens), gamma isoform [TaxId: 9606]
d3hj8a_ : (SER30) (ARG95) [view usage] : b.3.6.0 |Prealbumin-like |Aromatic compound dioxygenase |automated matches |automated matches |Rhodococcus opacus [TaxId: 37919]
d1yrba_ : (LYS166) (THR211) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |ATP(GTP)-binding protein PAB0955 |Pyrococcus abyssi [TaxId: 29292]
d1yr6a1 : (LEU164) (CYS207) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |ATP(GTP)-binding protein PAB0955 |Pyrococcus abyssi [TaxId: 29292]
d3ir6c_ : (GLY172) (ARG216) [view usage] : f.21.3.1 |Heme-binding four-helical bundle |Respiratory nitrate reductase 1 gamma chain |Respiratory nitrate reductase 1 gamma chain |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1fqjb_ : (VAL343) (ALA417) [view usage] : a.91.1.1 |Regulator of G-protein signaling, RGS |Regulator of G-protein signaling, RGS |Regulator of G-protein signaling, RGS |RGS9, RGS domain |Cow (Bos taurus) [TaxId: 9913]
d1sg4c_ : (ASP206) (LEU252) [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Dienoyl-CoA isomerase (delta3-delta2-enoyl-CoA isomerase) |Human (Homo sapiens) [TaxId: 9606]
d3o32b_ : (ASN3) (GLY65) [view usage] : b.3.6.1 |Prealbumin-like |Aromatic compound dioxygenase |Aromatic compound dioxygenase |Chlorocatechol 1,2-dioxygenase |Rhodococcus opacus [TaxId: 37919]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.69, c.94, c.6, c.26, c.80, c.14, a.211, e.22, d.144, c.37, d.185, c.55, a.25, d.19, f.21, a.100, a.138, b.3, a.91,
a.74, a.116, f.58, a.222, f.55