Tableau information
Concept source: d3wmmc_ amino acid (a.a.) range (GLN80)(LYS142)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLN80) (LEU85) H1
(VAL87) (SER102) H2
(GLY106) (CYS110) H3
(TYR122) (LYS142) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 127.8° H2
H3 -121.7° 102.6° H3
H4 58.1° 104.1° -85.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3qyhb_ : (GLU30) (GLU77) [view usage] : b.34.4.0 |SH3-like barrel |Electron transport accessory proteins |automated matches |automated matches |Pseudomonas putida [TaxId: 303]
d3qygb_ : (GLU30) (GLU77) [view usage] : b.34.4.0 |SH3-like barrel |Electron transport accessory proteins |automated matches |automated matches |Pseudomonas putida [TaxId: 303]
d3dina1 : (GLU274) (HIS343) [view usage] : a.162.1.1 |Pre-protein crosslinking domain of SecA |Pre-protein crosslinking domain of SecA |Pre-protein crosslinking domain of SecA |Pre-protein crosslinking domain of SecA |Thermotoga maritima MSB8 [TaxId: 243274]
d2hq8a_ : (SER120) (PHE180) [view usage] : a.39.1.0 |EF Hand-like |EF-hand |automated matches |automated matches |Renilla muelleri [TaxId: 37510]
d3qz9b_ : (TYR27) (GLU77) [view usage] : b.34.4.0 |SH3-like barrel |Electron transport accessory proteins |automated matches |automated matches |Pseudomonas putida [TaxId: 303]
d4u12a_ : (ASN13) (LEU90) [view usage] : a.292.1.1 |HP0242-like |HP0242-like |HP0242-like |Hypothetical protein HP0242 |Helicobacter pylori [TaxId: 210]
d1ahjb_ : (ALA30) (GLY88) [view usage] : b.34.4.4 |SH3-like barrel |Electron transport accessory proteins |Nitrile hydratase beta chain |Iron-containing nitrile hydratase |Rhodococcus erythropolis [TaxId: 1833]
d3wmmc_ : (GLN80) (LYS142) [view usage] : a.138.1.2 |Multiheme cytochromes |Multiheme cytochromes |Photosynthetic reaction centre (cytochrome subunit) |automated matches |Thermochromatium tepidum [TaxId: 1050]
d1ejia_ : (PRO406) (ASN475) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |Serine hydroxymethyltransferase |Mouse (Mus musculus) [TaxId: 10090]
d4o6za_ : (PRO375) (LEU439) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Plasmodium falciparum [TaxId: 36329]
d1wina_ : (ALA52) (GLY111) [view usage] : d.43.2.1 |EF-Ts domain-like |Band 7/SPFH domain |Band 7/SPFH domain |Flotillin-2 |Mouse (Mus musculus) [TaxId: 10090]
d4cjaa_ : (SER108) (ASP138) [view usage] : a.298.1.1 |Left-handed alpha-alpha superhelix |TAL effector-like |TAL (transcription activator-like) effector |BurrH |Burkholderia rhizoxinica [TaxId: 412963]
d3qxeb_ : (GLU30) (GLU77) [view usage] : b.34.4.0 |SH3-like barrel |Electron transport accessory proteins |automated matches |automated matches |Pseudomonas putida [TaxId: 303]
d1eysc_ : (GLN58) (LYS120) [view usage] : a.138.1.2 |Multiheme cytochromes |Multiheme cytochromes |Photosynthetic reaction centre (cytochrome subunit) |Photosynthetic reaction centre (cytochrome subunit) |Thermochromatium tepidum [TaxId: 1050]
d3t6dc_ : (LYS60) (THR122) [view usage] : a.138.1.2 |Multiheme cytochromes |Multiheme cytochromes |Photosynthetic reaction centre (cytochrome subunit) |automated matches |Blastochloris viridis [TaxId: 1079]
d1ztdb_ : (LYS61) (VAL125) [view usage] : a.149.1.2 |RNase III domain-like |RNase III domain-like |PF0609-like |automated matches |Pyrococcus furiosus [TaxId: 2261]
d1dxrc_ : (LYS60) (THR122) [view usage] : a.138.1.2 |Multiheme cytochromes |Multiheme cytochromes |Photosynthetic reaction centre (cytochrome subunit) |Photosynthetic reaction centre (cytochrome subunit) |Rhodopseudomonas viridis [TaxId: 1079]
d4o6zc_ : (PRO375) (LEU439) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Plasmodium falciparum [TaxId: 36329]
d2jula_ : (THR183) (ASN254) [view usage] : a.39.1.0 |EF Hand-like |EF-hand |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1prcc_ : (LYS60) (THR122) [view usage] : a.138.1.2 |Multiheme cytochromes |Multiheme cytochromes |Photosynthetic reaction centre (cytochrome subunit) |Photosynthetic reaction centre (cytochrome subunit) |Rhodopseudomonas viridis [TaxId: 1079]
d2hq8b_ : (SER120) (PHE180) [view usage] : a.39.1.0 |EF Hand-like |EF-hand |automated matches |automated matches |Renilla muelleri [TaxId: 37510]
d3t6ec_ : (LYS60) (THR122) [view usage] : a.138.1.2 |Multiheme cytochromes |Multiheme cytochromes |Photosynthetic reaction centre (cytochrome subunit) |Photosynthetic reaction centre (cytochrome subunit) |Rhodopseudomonas viridis [TaxId: 1079]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.298, c.67, b.34, a.39, a.138, a.149, a.162, a.292, d.43