Tableau information
Concept source: d3nxab_ amino acid (a.a.) range (THR6)(LEU66)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR6) (VAL23) H1
(SER34) (LYS44) H2
(LEU46) (SER51) H3
(THR53) (LEU66) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 130.4° H2
H3 -92.9° -79.1° H3
H4 -68.0° 159.5° 111.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1avpa_ : (ASN144) (THR196) [view usage] : d.3.1.7 |Cysteine proteinases |Cysteine proteinases |Adenain-like |Human adenovirus 2 proteinase, adenain |Mastadenovirus H2 [TaxId: 10515]
d2zu0a_ : (ASP369) (LEU418) [view usage] : b.80.6.1 |Single-stranded right-handed beta-helix |Stabilizer of iron transporter SufD |Stabilizer of iron transporter SufD |Stabilizer of iron transporter SufD |Escherichia coli [TaxId: 562]
d3dhia_ : (GLY238) (GLN301) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Pseudomonas mendocina [TaxId: 300]
d1okca_ : (SER45) (TRP70) [view usage] : f.42.1.1 |Mitochondrial carrier |Mitochondrial carrier |Mitochondrial carrier |ADP,ATP carrier protein |Cow (Bos taurus), heart isoform t1 [TaxId: 9913]
d3c02a_ : (ASN70) (GLU125) [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Plasmodium falciparum
d3c02a_ : (SER133) (ILE182) [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Plasmodium falciparum
d3dhgd_ : (SER232) (TYR295) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Pseudomonas mendocina [TaxId: 300]
d1iapa_ : (GLU169) (GLY230) [view usage] : a.91.1.1 |Regulator of G-protein signaling, RGS |Regulator of G-protein signaling, RGS |Regulator of G-protein signaling, RGS |p115RhoGEF |Human (Homo sapiens) [TaxId: 9606]
d1vljb_ : (TRP265) (GLY338) [view usage] : e.22.1.2 |Dehydroquinate synthase-like |Dehydroquinate synthase-like |Iron-containing alcohol dehydrogenase |NADH-dependent butanol dehydrogenase A (TM0820) |Thermotoga maritima [TaxId: 2336]
d3gysc_ : (SER3) (GLY59) [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |automated matches |Cat (Felis catus) [TaxId: 9685]
d3jwqa_ : (ASN661) (THR723) [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1vr0a1 : (THR176) (LYS219) [view usage] : c.148.1.1 |ComB-like |ComB-like |ComB-like |2-phosphosulfolactate phosphatase ComB |Clostridium acetobutylicum [TaxId: 1488]
d2qfva_ : (SER339) (LYS410) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2m0ra_ : (SER16) (LEU71) [view usage] : a.39.1.0 |EF Hand-like |EF-hand |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3dhga_ : (TYR218) (TYR295) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Pseudomonas mendocina [TaxId: 300]
d2heka1 : (THR94) (GLY140) [view usage] : a.211.1.1 |HD-domain/PDEase-like |HD-domain/PDEase-like |HD domain |Hypothetical protein aq_1910 |Aquifex aeolicus [TaxId: 63363]
d2llsa_ : (SER2) (GLY65) [view usage] : a.39.1.2 |EF Hand-like |EF-hand |S100 proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1r6bx1 : (THR81) (ILE138) [view usage] : a.174.1.1 |Double Clp-N motif |Double Clp-N motif |Double Clp-N motif |N-terminal, ClpS-binding domain of ClpA, an Hsp100 chaperone |Escherichia coli [TaxId: 562]
d3nxab_ : (THR6) (LEU66) [view usage] : a.39.1.0 |EF Hand-like |EF-hand |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4knab_ : (SER36) (LYS105) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Burkholderia thailandensis [TaxId: 271848]
d2pywa_ : (LEU126) (VAL175) [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d2y5ic_ : (SER3) (ASP61) [view usage] : a.39.1.2 |EF Hand-like |EF-hand |S100 proteins |automated matches |Zebrafish (Danio rerio) [TaxId: 7955]
d3c1va_ : (PRO4) (GLU52) [view usage] : a.39.1.2 |EF Hand-like |EF-hand |S100 proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2h42a_ : (LEU672) (ALA722) [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |cGMP-specific 3',5'-cyclic phosphodiesterase pde5a1-Ibmx |Human (Homo sapiens) [TaxId: 9606]
d2zoza2 : (ARG114) (ILE173) [view usage] : a.121.1.1 |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |Transcriptional regulator Cgl2612 |Corynebacterium glutamicum [TaxId: 1718]
d1vr0c_ : (THR176) (LYS219) [view usage] : c.148.1.1 |ComB-like |ComB-like |ComB-like |2-phosphosulfolactate phosphatase ComB |Clostridium acetobutylicum [TaxId: 1488]
d1nsha_ : (THR4) (LYS62) [view usage] : a.39.1.2 |EF Hand-like |EF-hand |S100 proteins |Calcyclin (S100) |Rabbit (Oryctolagus cuniculus), calgizzarin s100a11 [TaxId: 9986]
d2wc8d_ : (THR1) (PHE57) [view usage] : a.39.1.2 |EF Hand-like |EF-hand |S100 proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2nuga1 : (LYS96) (GLY146) [view usage] : a.149.1.1 |RNase III domain-like |RNase III domain-like |RNase III catalytic domain-like |RNase III endonuclease catalytic domain |Aquifex aeolicus [TaxId: 63363]
d1nlna_ : (ASN144) (ALA195) [view usage] : d.3.1.7 |Cysteine proteinases |Cysteine proteinases |Adenain-like |Human adenovirus 2 proteinase, adenain |Mastadenovirus H2 [TaxId: 10515]
d3ju8b_ : (ASP37) (LYS106) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d1x3xa_ : (GLY41) (THR76) [view usage] : d.120.1.0 |Cytochrome b5-like heme/steroid binding domain |Cytochrome b5-like heme/steroid binding domain |automated matches |automated matches |Pig roundworm (Ascaris suum) [TaxId: 6253]
d4llsb_ : (GLU50) (THR122) [view usage] : a.128.1.0 |Terpenoid synthases |Terpenoid synthases |automated matches |automated matches |Roseobacter denitrificans [TaxId: 375451]
d1khyd_ : (THR7) (LEU71) [view usage] : a.174.1.1 |Double Clp-N motif |Double Clp-N motif |Double Clp-N motif |N-terminal domain of ClpB (heat shock protein F84.1) |Escherichia coli [TaxId: 562]
d1khyd_ : (SER84) (MSE143) [view usage] : a.174.1.1 |Double Clp-N motif |Double Clp-N motif |Double Clp-N motif |N-terminal domain of ClpB (heat shock protein F84.1) |Escherichia coli [TaxId: 562]
d2xmza_ : (GLU121) (SER176) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Staphylococcus aureus [TaxId: 1280]
d1nuha_ : (GLY270) (ARG307) [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |Phosphoglucose isomerase, PGI |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.80, c.69, c.82, a.128, c.80, c.77, a.211, e.22, d.144, d.3, a.25, a.1, a.39, a.91, f.19, d.120, a.149, f.42, a.174, a.121,
c.148