Tableau information
Concept source: d2qara_ amino acid (a.a.) range (SER30)(GLN91)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER30) (SER46) H1
(GLY59) (LEU65) H2
(THR66) (SER74) H3
(GLY78) (GLN91) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -58.5° H2
H3 -73.6° 107.5° H3
H4 107.9° -112.7° 132.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.8° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1yuba_ : (TRP187) (ASN242) [view usage] : c.66.1.24 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |rRNA adenine dimethylase-like |rRNA adenine dimethylase |Streptococcus pneumoniae, Ermam [TaxId: 1313]
d1hypa_ : (LEU11) (GLY68) [view usage] : a.52.1.1 |Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |Plant lipid-transfer and hydrophobic proteins |Soybean hydrophobic protein |Soybean (Glycine max) [TaxId: 3847]
d1ji7a_ : (SER30) (LYS90) [view usage] : a.60.1.1 |SAM domain-like |SAM/Pointed domain |Pointed domain |Etv6 transcription factor pointed domain (Tel SAM) |Human (Homo sapiens) [TaxId: 9606]
d1x66a_ : (THR28) (SER91) [view usage] : a.60.1.0 |SAM domain-like |SAM/Pointed domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2qard_ : (SER30) (ARG92) [view usage] : a.60.1.1 |SAM domain-like |SAM/Pointed domain |Pointed domain |Etv6 transcription factor pointed domain (Tel SAM) |Escherichia coli [TaxId: 562]
d1bl8a_ : (ALA23) (GLY116) [view usage] : f.14.1.1 |Gated ion channels |Voltage-gated potassium channels |Voltage-gated potassium channels |Potassium channel protein |Streptomyces coelicolor [TaxId: 1902]
d2o6ka1 : (SER5) (PHE73) [view usage] : a.60.15.1 |SAM domain-like |YozE-like |YozE-like |Uncharacterized protein MW1311 |Staphylococcus aureus [TaxId: 1280]
d2qb0a_ : (SER30) (LYS90) [view usage] : a.60.1.1 |SAM domain-like |SAM/Pointed domain |Pointed domain |Etv6 transcription factor pointed domain (Tel SAM) |Escherichia coli [TaxId: 562]
d2qara_ : (SER30) (GLN91) [view usage] : a.60.1.1 |SAM domain-like |SAM/Pointed domain |Pointed domain |Etv6 transcription factor pointed domain (Tel SAM) |Escherichia coli [TaxId: 562]
d1r71a_ : (ALA140) (ASP193) [view usage] : a.4.14.1 |DNA/RNA-binding 3-helical bundle |KorB DNA-binding domain-like |KorB DNA-binding domain-like |Transcriptional repressor protein KorB DNA-binding domain |Escherichia coli [TaxId: 562]
d1or5a_ : (ASP6) (THR77) [view usage] : a.28.1.1 |Acyl carrier protein-like |ACP-like |Acyl-carrier protein (ACP) |Frenolicin polyketide synthase acyl carrier protein, Fren ACP |Streptomyces roseofulvus [TaxId: 33902]
d1ji7c_ : (SER30) (HIS98) [view usage] : a.60.1.1 |SAM domain-like |SAM/Pointed domain |Pointed domain |Etv6 transcription factor pointed domain (Tel SAM) |Human (Homo sapiens) [TaxId: 9606]
d1wz6a_ : (PHE15) (MET69) [view usage] : a.21.1.0 |HMG-box |HMG-box |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1sv0a_ : (SER55) (SER119) [view usage] : a.60.1.1 |SAM domain-like |SAM/Pointed domain |Pointed domain |Ets DNA-binding protein pokkuri (Yan) |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1aowa_ : (PRO85) (GLY157) [view usage] : a.65.1.1 |Annexin |Annexin |Annexin |Annexin IV |Cow (Bos taurus) [TaxId: 9913]
d2lefa_ : (PHE10) (PRO68) [view usage] : a.21.1.1 |HMG-box |HMG-box |HMG-box |Lymphoid enhancer-binding factor, LEF1 |Mouse (Mus musculus) [TaxId: 10090]
d2jnta_ : (PRO35) (GLY103) [view usage] : a.118.21.1 |alpha-alpha superhelix |Chemosensory protein Csp2 |Chemosensory protein Csp2 |automated matches |Silkworm (Bombyx mori) [TaxId: 7091]
d1lkya_ : (SER30) (GLN91) [view usage] : a.60.1.1 |SAM domain-like |SAM/Pointed domain |Pointed domain |Etv6 transcription factor pointed domain (Tel SAM) |Human (Homo sapiens) [TaxId: 9606]
d1nxha_ : (LEU6) (LYS46) [view usage] : a.200.1.1 |Hypothetical protein MTH393 |Hypothetical protein MTH393 |Hypothetical protein MTH393 |Hypothetical protein MTH393 |Methanobacterium thermoautotrophicum [TaxId: 145262]
d1r71c_ : (ASP141) (ASP193) [view usage] : a.4.14.1 |DNA/RNA-binding 3-helical bundle |KorB DNA-binding domain-like |KorB DNA-binding domain-like |Transcriptional repressor protein KorB DNA-binding domain |Escherichia coli [TaxId: 562]
d1kpsb_ : (LEU436) (PHE482) [view usage] : a.118.12.1 |alpha-alpha superhelix |Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain |Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain |Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain |Mouse (Mus musculus) [TaxId: 10090]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.118, c.66, a.65, a.4, a.60, a.28, a.21, a.52, f.14, a.200