Tableau information
Concept source: d3qb5b_ amino acid (a.a.) range (ARG116)(GLY216)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ARG116) (GLY124) H1
(VAL137) (ALA161) H2
(ARG166) (LEU183) H3
(ASP189) (GLY216) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 92.3° H2
H3 -106.6° -156.2° H3
H4 104.3° 22.2° -148.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3rnfa_ : (TRP317) (ASN382) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouA |Pseudomonas sp. [TaxId: 320855]
d1ayxa_ : (LEU169) (GLY259) [view usage] : a.102.1.1 |alpha/alpha toroid |Six-hairpin glycosidases |Glucoamylase |Glucoamylase |Yeast (Saccharomycopsis fibuligera) [TaxId: 4944]
d2wy7a_ : (GLN47) (GLN126) [view usage] : a.102.4.4 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Complement components |Thio-ester containing domain (TED) from Complement C3, aka C3d or C3dg |Human (Homo sapiens) [TaxId: 9606]
d1gu6a_ : (PHE310) (GLY424) [view usage] : a.138.1.3 |Multiheme cytochromes |Multiheme cytochromes |Di-heme elbow motif |Cytochrome c nitrite reductase |Escherichia coli [TaxId: 562]
d2p8qa_ : (ARG516) (LYS594) [view usage] : a.118.1.1 |alpha-alpha superhelix |ARM repeat |Armadillo repeat |Importin beta |Human (Homo sapiens) [TaxId: 9606]
d3dhgd_ : (TYR295) (ASP383) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Pseudomonas mendocina [TaxId: 300]
d1rj4a_ : (PRO63) (LEU147) [view usage] : a.29.6.1 |Bromodomain-like |Plant invertase/pectin methylesterase inhibitor |Plant invertase/pectin methylesterase inhibitor |Invertase inhibitor |Tobacco (Nicotiana tabacum) [TaxId: 4097]
d4p1ba_ : (TYR295) (ASP383) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Pseudomonas mendocina [TaxId: 300]
d2w67b3 : (LYS489) (LYS579) [view usage] : a.246.1.1 |Hyaluronidase domain-like |Hyaluronidase post-catalytic domain-like |Hyaluronidase post-catalytic domain-like |Glucosaminidase GH84 post-catalytic domain |Bacteroides thetaiotaomicron [TaxId: 818]
d2vr0e_ : (GLN351) (GLN462) [view usage] : a.138.1.3 |Multiheme cytochromes |Multiheme cytochromes |Di-heme elbow motif |automated matches |Desulfovibrio vulgaris [TaxId: 882]
d1t06a_ : (LYS140) (VAL196) [view usage] : a.118.1.17 |alpha-alpha superhelix |ARM repeat |BC3264-like |Hypothetical protein BC3264 |Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]
d3zboa_ : (LYS140) (GLY197) [view usage] : a.118.1.17 |alpha-alpha superhelix |ARM repeat |BC3264-like |automated matches |Bacillus cereus [TaxId: 1396]
d1mmod_ : (LEU332) (GLY394) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Methane monooxygenase hydrolase alpha subunit |Methylococcus capsulatus [TaxId: 414]
d4m76a_ : (GLN1033) (GLN1112) [view usage] : a.102.4.4 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Complement components |Thio-ester containing domain (TED) from Complement C3, aka C3d or C3dg |Human (Homo sapiens) [TaxId: 9606]
d1c3da_ : (GLN40) (LYS118) [view usage] : a.102.4.4 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Complement components |Thio-ester containing domain (TED) from Complement C3, aka C3d or C3dg |Human (Homo sapiens) [TaxId: 9606]
d2onta_ : (PHE161) (GLN218) [view usage] : a.28.3.1 |Acyl carrier protein-like |Retrovirus capsid dimerization domain-like |Retrovirus capsid protein C-terminal domain |HIV capsid protein, dimerisation domain |Human immunodeficiency virus type 1 [TaxId: 11676]
d1ygoa_ : (SER62) (TYR107) [view usage] : a.77.1.2 |DEATH domain |DEATH domain |DEATH domain, DD |Pelle death domain |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d3dhga_ : (ILE299) (ASP383) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Pseudomonas mendocina [TaxId: 300]
d4doda_ : (ASP217) (ILE295) [view usage] : a.102.1.2 |alpha/alpha toroid |Six-hairpin glycosidases |Cellulases catalytic domain |CelA cellulase |Caldicellulosiruptor bescii [TaxId: 31899]
d2rf7a_ : (PHE310) (GLY424) [view usage] : a.138.1.3 |Multiheme cytochromes |Multiheme cytochromes |Di-heme elbow motif |Cytochrome c nitrite reductase |Escherichia coli K-12 [TaxId: 83333]
d3oxuc_ : (GLN40) (LYS118) [view usage] : a.102.4.4 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Complement components |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2wk5a2 : (THR322) (GLN370) [view usage] : c.27.1.1 |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1fkao_ : (THR4) (GLY86) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Prokaryotic (30S subunit) |Thermus thermophilus [TaxId: 274]
d3qb5b_ : (ARG116) (GLY216) [view usage] : a.118.16.1 |alpha-alpha superhelix |Translin |Translin |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2wy8a_ : (GLN47) (GLN126) [view usage] : a.102.4.4 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Complement components |Thio-ester containing domain (TED) from Complement C3, aka C3d or C3dg |Human (Homo sapiens) [TaxId: 9606]
d2z46d_ : (LYS4) (MET61) [view usage] : a.280.1.1 |RbcX-like |RbcX-like |RbcX-like |RuBisCo chaperone RbcX |Synechococcus sp. [TaxId: 32049]
d4r5ja2 : (ASP510) (GLN604) [view usage] : a.8.4.1 |immunoglobulin/albumin-binding domain-like |Heat shock protein 70kD (HSP70), C-terminal subdomain |Heat shock protein 70kD (HSP70), C-terminal subdomain |automated matches |Escherichia coli [TaxId: 83333]
d3axja_ : (THR116) (GLY217) [view usage] : a.118.16.0 |alpha-alpha superhelix |Translin |automated matches |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1agra1 : (SER62) (ASP133) [view usage] : a.66.1.1 |Transducin (alpha subunit), insertion domain |Transducin (alpha subunit), insertion domain |Transducin (alpha subunit), insertion domain |Transducin (alpha subunit), insertion domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1ghqa_ : (GLN40) (GLN119) [view usage] : a.102.4.4 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Complement components |Thio-ester containing domain (TED) from Complement C3, aka C3d or C3dg |Human (Homo sapiens) [TaxId: 9606]
d3s8fa_ : (SER9) (ALA87) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Bacterial ba3 type cytochrome c oxidase subunit I |Thermus thermophilus [TaxId: 274]
d5eata2 : (SER354) (THR403) [view usage] : a.128.1.3 |Terpenoid synthases |Terpenoid synthases |Terpenoid cyclase C-terminal domain |5-Epi-aristolochene synthase |Tobacco (Nicotiana tabacum) [TaxId: 4097]
d3sqgb2 : (SER408) (LYS433) [view usage] : a.89.1.0 |Methyl-coenzyme M reductase alpha and beta chain C-terminal domain |Methyl-coenzyme M reductase alpha and beta chain C-terminal domain |automated matches |automated matches |Uncultured archaeon [TaxId: 115547]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
i.1, a.118, a.128, a.102, a.25, f.24, a.138, a.29, a.66, a.77, c.27, a.28, a.8, a.280, a.89, a.246