Tableau information
Concept source: d1b33a_ amino acid (a.a.) range (GLY110)(LEU159)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY110) (GLY119) H1
(PRO121) (SER137) H2
(SER141) (GLU147) H3
(GLY149) (LEU159) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 113.7° H2
H3 -87.7° 157.2° H3
H4 -55.6° -168.3° -34.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3rnba_ : (GLY238) (GLY310) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouA |Pseudomonas sp. [TaxId: 320855]
d1lbeb_ : (GLU6) (ALA65) [view usage] : c.23.14.3 |Flavodoxin-like |N-(deoxy)ribosyltransferase-like |ADP ribosyl cyclase-like |ADP ribosyl cyclase |California sea hare (Aplysia californica) [TaxId: 6500]
d2wlka1 : (GLY32) (PRO138) [view usage] : f.14.1.1 |Gated ion channels |Voltage-gated potassium channels |Voltage-gated potassium channels |Inward rectifier potassium channel kirbac3.1 |Magnetospirillum magnetotacticum [TaxId: 188]
d2hjda_ : (PRO16) (GLY94) [view usage] : a.2.13.1 |Long alpha-hairpin |Transcriptional repressor TraM |Transcriptional repressor TraM |automated matches |Agrobacterium tumefaciens [TaxId: 358]
d2iu5a2 : (PHE103) (GLU179) [view usage] : a.121.1.1 |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |Transcriptional activator DhaS |Lactococcus lactis [TaxId: 1358]
d4c52b_ : (LEU108) (GLU158) [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ovva_ : (ASP705) (ARG757) [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1e7pc_ : (VAL157) (GLN238) [view usage] : f.21.2.1 |Heme-binding four-helical bundle |Fumarate reductase respiratory complex transmembrane subunits |Fumarate reductase respiratory complex cytochrome b subunit, FrdC |Fumarate reductase respiratory complex cytochrome b subunit, FrdC |Wolinella succinogenes [TaxId: 844]
d2hjdd_ : (PRO16) (GLY94) [view usage] : a.2.13.1 |Long alpha-hairpin |Transcriptional repressor TraM |Transcriptional repressor TraM |automated matches |Agrobacterium tumefaciens [TaxId: 358]
d1z77a2 : (LEU121) (THR199) [view usage] : a.121.1.1 |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |Transcriptional regulator TM1030 |Thermotoga maritima [TaxId: 2336]
d4mi2b_ : (PRO195) (LYS259) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium abscessus [TaxId: 561007]
d1upgb_ : (PRO16) (LEU93) [view usage] : a.2.13.1 |Long alpha-hairpin |Transcriptional repressor TraM |Transcriptional repressor TraM |Transcriptional repressor TraM |Agrobacterium tumefaciens [TaxId: 358]
d4dr0b_ : (THR43) (LEU112) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d3ovuc_ : (LEU86) (TYR140) [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, alpha-chain |Human (Homo sapiens) [TaxId: 9606]
d1nh1a_ : (GLY267) (LEU316) [view usage] : e.45.1.1 |Antivirulence factor |Antivirulence factor |Antivirulence factor |Type III effector AvrB |Pseudomonas syringae [TaxId: 317]
d1qgka_ : (ASN124) (SER170) [view usage] : a.118.1.1 |alpha-alpha superhelix |ARM repeat |Armadillo repeat |Importin beta |Human (Homo sapiens) [TaxId: 9606]
d1us6b_ : (PRO16) (LEU93) [view usage] : a.2.13.1 |Long alpha-hairpin |Transcriptional repressor TraM |Transcriptional repressor TraM |Transcriptional repressor TraM |Agrobacterium tumefaciens [TaxId: 358]
d2vkdb_ : (CYS395) (LYS455) [view usage] : c.68.1.22 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |Glycosylating toxin catalytic domain-like |automated matches |Clostridium sordellii [TaxId: 1505]
d1mwba_ : (ARG64) (VAL121) [view usage] : a.1.1.1 |Globin-like |Globin-like |Truncated hemoglobin |Protozoan/bacterial hemoglobin |Synechocystis sp. PCC 6803 [TaxId: 1148]
d1us6a_ : (PRO16) (GLY94) [view usage] : a.2.13.1 |Long alpha-hairpin |Transcriptional repressor TraM |Transcriptional repressor TraM |Transcriptional repressor TraM |Agrobacterium tumefaciens [TaxId: 358]
d3nvia_ : (HIS174) (LYS214) [view usage] : a.183.1.0 |Nop domain |Nop domain |automated matches |automated matches |Pyrococcus furiosus [TaxId: 186497]
d2g7sa2 : (PRO115) (THR191) [view usage] : a.121.1.1 |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |Putative transcriptional regulator Atu0279 |Agrobacterium tumefaciens [TaxId: 358]
d1p7ba2 : (VAL47) (ARG151) [view usage] : f.14.1.1 |Gated ion channels |Voltage-gated potassium channels |Voltage-gated potassium channels |Inward rectifier potassium channel Kirbac1.1 |Burkholderia pseudomallei [TaxId: 28450]
d4po5a_ : (GLY111) (SER161) [view usage] : a.1.1.0 |Globin-like |Globin-like |automated matches |automated matches |Synechocystis sp. [TaxId: 1111708]
d2lhja_ : (ASN45) (ARG95) [view usage] : a.21.1.0 |HMG-box |HMG-box |automated matches |automated matches |Babesia bovis [TaxId: 5865]
d3rnca_ : (ARG233) (GLY310) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouA |Pseudomonas sp. [TaxId: 320855]
d1tfba1 : (ILE166) (GLU203) [view usage] : a.74.1.2 |Cyclin-like |Cyclin-like |Transcription factor IIB (TFIIB), core domain |Transcription factor IIB (TFIIB), core domain |Human (Homo sapiens) [TaxId: 9606]
d3fald_ : (SER205) (TYR304) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Oxysterols receptor LXR-alpha |Mouse (Mus musculus) [TaxId: 10090]
d1ohhd1 : (LEU434) (HIS477) [view usage] : a.69.1.1 |Left-handed superhelix |C-terminal domain of alpha and beta subunits of F1 ATP synthase |C-terminal domain of alpha and beta subunits of F1 ATP synthase |F1 ATP synthase beta subunit, domain 3 |Cow (Bos taurus) [TaxId: 9913]
d1ufja_ : (HIS82) (GLY150) [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Myoglobin |Sperm whale (Physeter catodon) [TaxId: 9755]
d1f9xa_ : (ASN259) (GLY288) [view usage] : g.52.1.1 |Inhibitor of apoptosis (IAP) repeat |Inhibitor of apoptosis (IAP) repeat |Inhibitor of apoptosis (IAP) repeat |BIR domains of XIAP |Human (Homo sapiens) [TaxId: 9606]
d1oj6d_ : (GLU87) (ASP149) [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Neuroglobin |Human (Homo sapiens) [TaxId: 9606]
d1upga_ : (PRO16) (ILE92) [view usage] : a.2.13.1 |Long alpha-hairpin |Transcriptional repressor TraM |Transcriptional repressor TraM |Transcriptional repressor TraM |Agrobacterium tumefaciens [TaxId: 358]
d1dd3a1 : (ILE3) (GLU54) [view usage] : a.108.1.1 |Ribosomal protein L7/12, oligomerisation (N-terminal) domain |Ribosomal protein L7/12, oligomerisation (N-terminal) domain |Ribosomal protein L7/12, oligomerisation (N-terminal) domain |Ribosomal protein L7/12, oligomerisation (N-terminal) domain |Thermotoga maritima [TaxId: 2336]
d1n97a_ : (ASP127) (PRO201) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cyp175a1 |Thermus thermophilus [TaxId: 274]
d2aclh_ : (SER205) (TYR304) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Oxysterols receptor LXR-alpha |Mouse (Mus musculus) [TaxId: 10090]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.104, a.118, c.68, c.14, a.211, c.23, a.123, a.25, f.21, a.1, g.52, f.1, a.74, a.21, a.69, a.2, a.121, f.14, e.45, a.183,
a.108