Tableau information
Concept source: d3fkka_ amino acid (a.a.) range (HIS248)(LEU311)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(HIS248) (TRP258) H1
(PRO260) (ASN266) H2
(LEU272) (GLY282) H3
(ASP299) (LEU311) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -53.9° H2
H3 75.3° 119.0° H3
H4 142.2° -155.8° -67.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3d0cb_ : (ASN232) (GLN301) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Oceanobacillus iheyensis [TaxId: 221109]
d1am4a_ : (SER48) (GLU127) [view usage] : a.116.1.1 |GTPase activation domain, GAP |GTPase activation domain, GAP |BCR-homology GTPase activation domain (BH-domain) |p50 RhoGAP domain |Human (Homo sapiens) [TaxId: 9606]
d1op1a_ : (MET22) (GLY89) [view usage] : a.13.1.1 |RAP domain-like |RAP domain-like |RAP domain |alpha-2-Macroglobulin receptor associated protein (RAP) |Human (Homo sapiens) [TaxId: 9606]
d1xxxa1 : (ILE234) (SER297) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Dihydrodipicolinate synthase |Mycobacterium tuberculosis [TaxId: 1773]
d3d0ca_ : (GLN233) (GLU302) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Oceanobacillus iheyensis [TaxId: 221109]
d3pb2b_ : (LEU229) (GLY292) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Thermotoga maritima [TaxId: 2336]
d1fdya_ : (TRP215) (GLU295) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |N-acetylneuraminate lyase |Escherichia coli [TaxId: 562]
d3irda_ : (ASN228) (ASN290) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Dihydrodipicolinate synthase |Clostridium botulinum [TaxId: 441771]
d2iy5a1 : (GLU16) (GLU84) [view usage] : a.2.7.2 |Long alpha-hairpin |tRNA-binding arm |Phenylalanyl-tRNA synthetase (PheRS) |Phenylalanyl-tRNA synthetase (PheRS) |Thermus thermophilus [TaxId: 274]
d3gvva_ : (CYS35) (PHE76) [view usage] : c.1.22.1 |TIM beta/alpha-barrel |UROD/MetE-like |Uroporphyrinogen decarboxylase, UROD |Uroporphyrinogen decarboxylase, UROD |Human (Homo sapiens) [TaxId: 9606]
d1v29a_ : (PRO135) (GLY159) [view usage] : d.149.1.1 |Nitrile hydratase alpha chain |Nitrile hydratase alpha chain |Nitrile hydratase alpha chain |Cobalt-containing nitrile hydratase |Bacillus smithii [TaxId: 1479]
d2pcqa_ : (LEU216) (GLY280) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d1bxma_ : (THR4) (LEU66) [view usage] : a.134.1.1 |Fungal elicitin |Fungal elicitin |Fungal elicitin |beta-cryptogein |Phytophthora cryptogea [TaxId: 4786]
d1cc1l_ : (SER346) (GLN398) [view usage] : e.18.1.1 |HydB/Nqo4-like |HydB/Nqo4-like |Nickel-iron hydrogenase, large subunit |Nickel-iron hydrogenase, large subunit |Desulfomicrobium baculatum [TaxId: 899]
d2wnqc_ : (ILE229) (GLU295) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Escherichia coli [TaxId: 562]
d3msxb_ : (THR505) (ASN546) [view usage] : a.116.1.0 |GTPase activation domain, GAP |GTPase activation domain, GAP |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1ljpa_ : (THR4) (LEU66) [view usage] : a.134.1.1 |Fungal elicitin |Fungal elicitin |Fungal elicitin |beta-cinnamomin |Fungus (Phytophthora cinnamomi) [TaxId: 4785]
d1tm9a_ : (ASN5) (GLU57) [view usage] : a.225.1.1 |Hypothetical protein MG354 |Hypothetical protein MG354 |Hypothetical protein MG354 |Hypothetical protein MG354 |Mycoplasma genitalium [TaxId: 2097]
d1s5ta_ : (PHE226) (GLY290) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Dihydrodipicolinate synthase |Escherichia coli [TaxId: 562]
d1i4sa_ : (ALA84) (GLY146) [view usage] : a.149.1.1 |RNase III domain-like |RNase III domain-like |RNase III catalytic domain-like |RNase III endonuclease catalytic domain |Aquifex aeolicus [TaxId: 63363]
d1ckta_ : (SER13) (TYR77) [view usage] : a.21.1.1 |HMG-box |HMG-box |HMG-box |High mobility group protein 1, HMG1 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2q6za_ : (CYS35) (PHE76) [view usage] : c.1.22.1 |TIM beta/alpha-barrel |UROD/MetE-like |Uroporphyrinogen decarboxylase, UROD |Uroporphyrinogen decarboxylase, UROD |Human (Homo sapiens) [TaxId: 9606]
d1jx1c_ : (ILE57) (ILE85) [view usage] : d.36.1.1 |Chalcone isomerase |Chalcone isomerase |Chalcone isomerase |Chalcone isomerase |Alfalfa (Medicago sativa) [TaxId: 3879]
d1gpqa_ : (ASN100) (PHE128) [view usage] : d.233.1.1 |Inhibitor of vertebrate lysozyme, Ivy |Inhibitor of vertebrate lysozyme, Ivy |Inhibitor of vertebrate lysozyme, Ivy |Inhibitor of vertebrate lysozyme, Ivy |Escherichia coli [TaxId: 562]
d1lrea_ : (LYS24) (TYR88) [view usage] : a.13.1.1 |RAP domain-like |RAP domain-like |RAP domain |alpha-2-Macroglobulin receptor associated protein (RAP) |Human (Homo sapiens) [TaxId: 9606]
d3cyva_ : (MET25) (TYR67) [view usage] : c.1.22.1 |TIM beta/alpha-barrel |UROD/MetE-like |Uroporphyrinogen decarboxylase, UROD |Uroporphyrinogen decarboxylase, UROD |Shigella flexneri [TaxId: 623]
d1vfia1 : (CYS9) (ALA70) [view usage] : g.84.1.1 |Cysteine zipper |Vanabin-like |Vanabin-like |Vanadium-binding protein 2, vanabin 2 |Vanadium-rich ascidian (Ascidia sydneiensis samea) [TaxId: 79730]
d1b47a2 : (MET106) (PHE169) [view usage] : a.48.1.1 |N-cbl like |N-terminal domain of cbl (N-cbl) |N-terminal domain of cbl (N-cbl) |N-terminal domain of cbl (N-cbl) |Human (Homo sapiens) [TaxId: 9606]
d1ahja_ : (PRO125) (GLY149) [view usage] : d.149.1.1 |Nitrile hydratase alpha chain |Nitrile hydratase alpha chain |Nitrile hydratase alpha chain |Iron-containing nitrile hydratase |Rhodococcus erythropolis [TaxId: 1833]
d2fq4a2 : (SER79) (TYR124) [view usage] : a.121.1.1 |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |Transcriptional regulator BC3163 |Bacillus cereus [TaxId: 1396]
d2yxga_ : (ASP223) (GLY287) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Dihydrodipicolinate synthase |Methanocaldococcus jannaschii [TaxId: 243232]
d2yxgb_ : (ASP223) (GLY287) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Dihydrodipicolinate synthase |Methanocaldococcus jannaschii [TaxId: 243232]
d4ky0c_ : (ASP259) (GLY296) [view usage] : f.49.1.1 |Proton glutamate symport protein |Proton glutamate symport protein |Proton glutamate symport protein |automated matches |Thermococcus kodakarensis [TaxId: 69014]
d2p85a_ : (THR305) (PRO367) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1boca_ : (PHE36) (ILE73) [view usage] : a.39.1.1 |EF Hand-like |EF-hand |Calbindin D9K |Calbindin D9K |Cow (Bos taurus) [TaxId: 9913]
d2h8va_ : (GLU8) (SER57) [view usage] : a.39.2.1 |EF Hand-like |Insect pheromone/odorant-binding proteins |Insect pheromone/odorant-binding proteins |Pheromone-binding protein asp1 |Honeybee (Apis mellifera) [TaxId: 7460]
d1bega_ : (ALA5) (ASN67) [view usage] : a.134.1.1 |Fungal elicitin |Fungal elicitin |Fungal elicitin |beta-cryptogein |Phytophthora cryptogea [TaxId: 4786]
d3abwa_ : (THR20) (GLY88) [view usage] : f.13.1.0 |Family A G protein-coupled receptor-like |Family A G protein-coupled receptor-like |automated matches |automated matches |Natronomonas pharaonis [TaxId: 348780]
d1la3a_ : (THR147) (LEU185) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Recoverin |Cow (Bos taurus) [TaxId: 9913]
d1lria_ : (THR4) (LEU66) [view usage] : a.134.1.1 |Fungal elicitin |Fungal elicitin |Fungal elicitin |beta-cryptogein |Phytophthora cryptogea [TaxId: 4786]
d1tjfb_ : (PRO158) (GLN207) [view usage] : a.192.1.1 |N-terminal domain of adenylylcyclase associated protein, CAP |N-terminal domain of adenylylcyclase associated protein, CAP |N-terminal domain of adenylylcyclase associated protein, CAP |N-terminal domain of adenylylcyclase associated protein, CAP |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
d1xxxb_ : (ILE234) (SER297) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Dihydrodipicolinate synthase |Mycobacterium tuberculosis [TaxId: 1773]
d3noeb_ : (ASP225) (GLY289) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, a.104, e.18, f.13, a.39, a.116, a.149, a.21, d.149, a.2, a.48, f.49, a.121, a.192, d.36, d.233, a.13, a.134, a.225, g.84