Tableau information
Concept source: d1tb5a_ amino acid (a.a.) range (LEU400)(MET483)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU400) (GLY425) H1
(ASP433) (ALA437) H2
(SER438) (VAL462) H3
(VAL462) (MET483) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 138.5° H2
H3 124.8° -77.2° H3
H4 -59.3° -93.5° -169.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1gssa1 : (ASP80) (LYS125) [view usage] : a.45.1.1 |GST C-terminal domain-like |GST C-terminal domain-like |Glutathione S-transferase (GST), C-terminal domain |Class pi GST |Human (Homo sapiens) [TaxId: 9606]
d1th0a_ : (ASP547) (HIS585) [view usage] : d.3.1.7 |Cysteine proteinases |Cysteine proteinases |Adenain-like |Sentrin-specific protease 2, SENP2 |Human (Homo sapiens) [TaxId: 9606]
d1fzia_ : (TRP301) (ASN375) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Methane monooxygenase hydrolase alpha subunit |Methylococcus capsulatus [TaxId: 414]
d1iwaa1 : (ILE413) (ILE465) [view usage] : c.1.14.1 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |RuBisCo, large subunit, C-terminal domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Galdieria partita [TaxId: 83374]
d4ddda_ : (SER269) (GLY322) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Ehrlichia chaffeensis [TaxId: 205920]
d1dpra2 : (THR65) (LEU120) [view usage] : a.76.1.1 |Iron-dependent repressor protein, dimerization domain |Iron-dependent repressor protein, dimerization domain |Iron-dependent repressor protein, dimerization domain |Diphtheria toxin repressor (DtxR) |Corynebacterium diphtheriae [TaxId: 1717]
d1zoaa_ : (PRO142) (SER226) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
d1hrya_ : (ASN10) (TYR69) [view usage] : a.21.1.1 |HMG-box |HMG-box |HMG-box |SRY |Human (Homo sapiens) [TaxId: 9606]
d2le4a_ : (ALA10) (HIS68) [view usage] : a.21.1.1 |HMG-box |HMG-box |HMG-box |Sox-2 |Human (Homo sapiens) [TaxId: 9606]
d4im9c_ : (GLY44) (ALA83) [view usage] : a.236.1.0 |DNA primase DnaG, C-terminal domain |DNA primase DnaG, C-terminal domain |automated matches |automated matches |Vibrio cholerae [TaxId: 345073]
d4f7fa_ : (THR2) (THR72) [view usage] : a.39.2.0 |EF Hand-like |Insect pheromone/odorant-binding proteins |automated matches |automated matches |African malaria mosquito (Anopheles gambiae) [TaxId: 7165]
d2heka1 : (SER25) (HIS88) [view usage] : a.211.1.1 |HD-domain/PDEase-like |HD-domain/PDEase-like |HD domain |Hypothetical protein aq_1910 |Aquifex aeolicus [TaxId: 63363]
d2wtga_ : (GLU87) (ASN155) [view usage] : a.1.1.0 |Globin-like |Globin-like |automated matches |automated matches |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d1mlda2 : (THR147) (GLY244) [view usage] : d.162.1.1 |LDH C-terminal domain-like |LDH C-terminal domain-like |Lactate & malate dehydrogenases, C-terminal domain |Malate dehydrogenase |Pig (Sus scrofa) [TaxId: 9823]
d4o29a_ : (ALA-1) (ASP44) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Pyrobaculum aerophilum [TaxId: 178306]
d3v2la_ : (THR2) (ILE73) [view usage] : a.39.2.0 |EF Hand-like |Insect pheromone/odorant-binding proteins |automated matches |automated matches |African malaria mosquito (Anopheles gambiae) [TaxId: 7165]
d1ejli_ : (ILE121) (GLY161) [view usage] : a.118.1.1 |alpha-alpha superhelix |ARM repeat |Armadillo repeat |Importin alpha |Mouse (Mus musculus) [TaxId: 10090]
d4jibd_ : (TRP816) (ILE904) [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4htxb_ : (TRP816) (ILE904) [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2fjya_ : (LYS14) (ASP63) [view usage] : a.39.2.1 |EF Hand-like |Insect pheromone/odorant-binding proteins |Insect pheromone/odorant-binding proteins |Moth pheromone-binding protein, PBP |Silkworm (Bombyx mori) [TaxId: 7091]
d1nekc_ : (ILE22) (TRP129) [view usage] : f.21.2.2 |Heme-binding four-helical bundle |Fumarate reductase respiratory complex transmembrane subunits |Succinate dehydrogenase/Fumarate reductase transmembrane subunits (SdhC/FrdC and SdhD/FrdD) |Succinate dehydrogenase subunit SdhC |Escherichia coli [TaxId: 562]
d3ubma_ : (ASP295) (GLU321) [view usage] : c.123.1.0 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |automated matches |automated matches |Acetobacter aceti [TaxId: 435]
d1rqia_ : (PHE24) (ASP88) [view usage] : a.128.1.1 |Terpenoid synthases |Terpenoid synthases |Isoprenyl diphosphate synthases |Farnesyl diphosphate synthase (geranyltranstransferase) |Escherichia coli [TaxId: 562]
d2dfda2 : (THR153) (GLY250) [view usage] : d.162.1.1 |LDH C-terminal domain-like |LDH C-terminal domain-like |Lactate & malate dehydrogenases, C-terminal domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1qtra_ : (PRO190) (LEU239) [view usage] : c.69.1.7 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Proline iminopeptidase-like |Proline aminopeptidase |Serratia marcescens [TaxId: 615]
d2kpha_ : (LEU8) (ALA64) [view usage] : a.39.2.1 |EF Hand-like |Insect pheromone/odorant-binding proteins |Insect pheromone/odorant-binding proteins |automated matches |Amyelois transitella [TaxId: 680683]
d1bxna1 : (ILE415) (THR463) [view usage] : c.1.14.1 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |RuBisCo, large subunit, C-terminal domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Alcaligenes eutrophus [TaxId: 106590]
d3ocec_ : (PRO42) (ASN107) [view usage] : a.127.1.0 |L-aspartase-like |L-aspartase-like |automated matches |automated matches |Brucella melitensis [TaxId: 359391]
d4htzd_ : (GLY815) (ILE904) [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4gnib2 : (GLY242) (SER289) [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Chaetomium thermophilum [TaxId: 759272]
d4d09b_ : (TRP816) (ILE904) [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1vf6c_ : (ASP121) (THR170) [view usage] : a.194.1.1 |L27 domain |L27 domain |L27 domain |Maguk p55 subfamily member 5, Patj |Mouse (Mus musculus) [TaxId: 10090]
d2of2a_ : (ILE419) (THR501) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Lymphocyte kinase (lck) |Human (Homo sapiens) [TaxId: 9606]
d1sa3a_ : (THR3) (THR53) [view usage] : c.52.1.23 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease MspI |Restriction endonuclease MspI |Moraxella sp. [TaxId: 479]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.123, c.69, c.94, a.104, a.118, a.128, c.66, a.127, a.211, d.144, c.55, d.3, a.25, f.21, c.52, a.1, a.39, d.162, a.45,
a.21, a.76, a.194, a.236