Tableau information
Concept source: d2cv5h_ amino acid (a.a.) range (SER35)(THR119)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER35) (VAL45) H1
(SER52) (LYS82) H2
(SER88) (LEU97) H3
(GLY101) (THR119) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 107.5° H2
H3 -66.8° 113.0° H3
H4 104.2° -79.5° 166.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1kx5d_ : (ALA35) (SER120) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |Histone H2B |African clawed frog (Xenopus laevis) [TaxId: 8355]
d3azid_ : (TYR37) (ALA124) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1hq3f_ : (SER38) (LYS125) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |Histone H2B |Chicken (Gallus gallus), erythrocytes [TaxId: 9031]
d1p3ph_ : (ALA1435) (SER1520) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |Histone H2B |African clawed frog (Xenopus laevis) [TaxId: 8355]
d1p3bd_ : (TYR1234) (ALA1321) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |Histone H2B |African clawed frog (Xenopus laevis) [TaxId: 8355]
d1id3h_ : (TYR40) (SER125) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |Histone H2B |Baker's yeast (Saccharomyces cerevisiae), H2B.2 [TaxId: 4932]
d1kx3d_ : (ALA35) (ALA121) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |Histone H2B |African clawed frog (Xenopus laevis) [TaxId: 8355]
d3leld_ : (ALA35) (ALA121) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |Histone H2B |African clawed frog (Xenopus laevis) [TaxId: 8355]
d1m1ad_ : (ALA1235) (SER1320) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |Histone H2B |African clawed frog (Xenopus laevis) [TaxId: 8355]
d3a6nh_ : (SER38) (SER123) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1id3d_ : (TYR40) (SER127) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |Histone H2B |Baker's yeast (Saccharomyces cerevisiae), H2B.2 [TaxId: 4932]
d4ctha_ : (ALA405) (ILE475) [view usage] : d.92.1.4 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neutral endopeptidase (neprilysin) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1q9cg_ : (GLU13) (LYS96) [view usage] : a.22.1.3 |Histone-fold |Histone-fold |TBP-associated factors, TAFs |Histone domain of Son of sevenless protein |Human (Homo sapiens) [TaxId: 9606]
d1p34d_ : (ILE1236) (ALA1321) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |Histone H2B |African clawed frog (Xenopus laevis) [TaxId: 8355]
d1p34h_ : (ALA1435) (ALA1521) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |Histone H2B |African clawed frog (Xenopus laevis) [TaxId: 8355]
d4m6ba1 : (SER41) (SER126) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
d3azfh_ : (SER38) (SER123) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3afah_ : (SER38) (ALA124) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1hq3b_ : (SER38) (SER124) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |Histone H2B |Chicken (Gallus gallus), erythrocytes [TaxId: 9031]
d4jjnd_ : (TYR40) (THR128) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
d1s32d_ : (ALA1235) (ALA1321) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |Histone H2B |African clawed frog (Xenopus laevis) [TaxId: 8355]
d3c1bh_ : (TYR1434) (ALA1521) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |Histone H2B |Xenopus (Silurana) tropicalis [TaxId: 8364]
d2hiob_ : (TYR37) (LYS125) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |Histone H2B |Chicken (Gallus gallus), erythrocytes [TaxId: 9031]
d3lelh_ : (TYR34) (ALA121) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |Histone H2B |African clawed frog (Xenopus laevis) [TaxId: 8355]
d4nftc1 : (TYR6) (TYR90) [view usage] : a.22.1.0 |Histone-fold |Histone-fold |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2pyod_ : (TYR34) (SER120) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d3c1ch1 : (ALA1435) (SER1520) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |Histone H2B |Xenopus (Silurana) tropicalis [TaxId: 8364]
d2cv5h_ : (SER35) (THR119) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |Histone H2B |Human (Homo sapiens), H2B.k [TaxId: 9606]
d1p3gd_ : (ALA1235) (ALA1321) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |Histone H2B |African clawed frog (Xenopus laevis) [TaxId: 8355]
d1p3ad_ : (ALA1235) (ALA1321) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |Histone H2B |African clawed frog (Xenopus laevis) [TaxId: 8355]
d1q9cd_ : (LEU23) (LYS96) [view usage] : a.22.1.3 |Histone-fold |Histone-fold |TBP-associated factors, TAFs |Histone domain of Son of sevenless protein |Human (Homo sapiens) [TaxId: 9606]
d3azjd_ : (ILE39) (ALA124) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1u35h_ : (ILE1436) (LYS1522) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3a6nd_ : (SER38) (SER123) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3wkjd_ : (TYR38) (SER124) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3afad_ : (TYR37) (ALA124) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2cv5d1 : (SER35) (ALA121) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |Histone H2B |Human (Homo sapiens), H2B.k [TaxId: 9606]
d1p3ah_ : (ALA1435) (ALA1521) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |Histone H2B |African clawed frog (Xenopus laevis) [TaxId: 8355]
d1aoid_ : (ALA35) (SER120) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |Histone H2B |African clawed frog (Xenopus laevis) [TaxId: 8355]
d1s32h_ : (TYR1434) (THR1519) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |Histone H2B |African clawed frog (Xenopus laevis) [TaxId: 8355]
d3wkjh_ : (TYR38) (SER124) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1f66d_ : (TYR1234) (LYS1322) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |Histone H2B |African clawed frog (Xenopus laevis) [TaxId: 8355]
d1p3fh_ : (ALA1435) (SER1520) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |Histone H2B |African clawed frog (Xenopus laevis) [TaxId: 8355]
d1eqzf_ : (SER38) (LYS125) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |Histone H2B |Chicken (Gallus gallus), erythrocytes [TaxId: 9031]
d1u35d1 : (ILE1236) (SER1321) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |Histone H2B |Mouse (Mus musculus), H2Ba [TaxId: 10090]
d2nqbd_ : (ALA1235) (SER1321) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d2yazb_ : (ASP134) (LYS214) [view usage] : a.204.1.0 |all-alpha NTP pyrophosphatases |all-alpha NTP pyrophosphatases |automated matches |automated matches |Leishmania major [TaxId: 5664]
d1eqzb_ : (SER38) (SER124) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |Histone H2B |Chicken (Gallus gallus), erythrocytes [TaxId: 9031]
d1q9cb_ : (GLY21) (LYS96) [view usage] : a.22.1.3 |Histone-fold |Histone-fold |TBP-associated factors, TAFs |Histone domain of Son of sevenless protein |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.92, a.204, a.22