Tableau information
Concept source: d2uula_ amino acid (a.a.) range (GLN78)(ASN139)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLN78) (GLY102) H1
(GLU109) (ILE115) H2
(ILE115) (THR121) H3
(PRO126) (ASN139) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -123.6° H2
H3 -172.5° -53.1° H3
H4 -55.7° -145.6° 122.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1k83e1 : (ASN5) (SER59) [view usage] : c.52.3.1 |Restriction endonuclease-like |Eukaryotic RPB5 N-terminal domain |Eukaryotic RPB5 N-terminal domain |Eukaryotic RPB5 N-terminal domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1qsda_ : (THR4) (LEU103) [view usage] : a.7.5.1 |Spectrin repeat-like |Tubulin chaperone cofactor A |Tubulin chaperone cofactor A |Tubulin chaperone cofactor A |Baker's yeast (Saccharomyces cerevisiae), Rbl2p [TaxId: 4932]
d1i6he1 : (GLU4) (SER59) [view usage] : c.52.3.1 |Restriction endonuclease-like |Eukaryotic RPB5 N-terminal domain |Eukaryotic RPB5 N-terminal domain |Eukaryotic RPB5 N-terminal domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1dlca3 : (ALA122) (LEU194) [view usage] : f.1.3.1 |Toxins' membrane translocation domains |delta-Endotoxin (insectocide), N-terminal domain |delta-Endotoxin (insectocide), N-terminal domain |delta-Endotoxin (insectocide), N-terminal domain |Bacillus thuringiensis tenebrionis, CRYIIIA (BT13) [TaxId: 1444]
d3hila_ : (THR907) (LEU936) [view usage] : a.60.1.0 |SAM domain-like |SAM/Pointed domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3kkaa_ : (THR917) (LEU946) [view usage] : a.60.1.0 |SAM domain-like |SAM/Pointed domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1kxua2 : (TYR164) (GLY225) [view usage] : a.74.1.1 |Cyclin-like |Cyclin-like |Cyclin |Cyclin H (mcs2) |Human (Homo sapiens) [TaxId: 9606]
d3q7ga_ : (GLN405) (GLU476) [view usage] : a.47.4.0 |STAT-like |CAPPD, an extracellular domain of amyloid beta A4 protein |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2r7da2 : (THR7) (ARG62) [view usage] : b.40.4.16 |OB-fold |Nucleic acid-binding proteins |RNB domain-like |Ribonuclease II family protein DR0020 |Deinococcus radiodurans [TaxId: 1299]
d2pvra_ : (GLY199) (ASN262) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Protein kinase CK2, alpha subunit |Human (Homo sapiens) [TaxId: 9606]
d1mmod_ : (GLU243) (GLY325) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Methane monooxygenase hydrolase alpha subunit |Methylococcus capsulatus [TaxId: 414]
d4rc6b_ : (ASN158) (GLY227) [view usage] : a.25.1.6 |Ferritin-like |Ferritin-like |PMT1231-like |automated matches |Synechococcus elongatus [TaxId: 1140]
d1nike_ : (GLU4) (SER59) [view usage] : i.8.1.1 |RNA polymerase |RNA polymerase |RNA polymerase |Complete 12-subunit RNA polymerase II complex |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4qq7a2 : (MET151) (MET201) [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d3fyba_ : (GLN6) (VAL70) [view usage] : a.293.1.0 |SMc04008-like |SMc04008-like |automated matches |automated matches |Alcanivorax borkumensis [TaxId: 393595]
d4ikha2 : (ARG148) (GLY204) [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |Pseudomonas protegens [TaxId: 220664]
d3fgaa_ : (LEU10) (SER49) [view usage] : a.118.1.2 |alpha-alpha superhelix |ARM repeat |HEAT repeat |Constant regulatory domain of protein phosphatase 2a, pr65alpha |Mouse (Mus musculus) [TaxId: 10090]
d4p08a1 : (VAL160) (SER204) [view usage] : c.69.1.21 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |PepX catalytic domain-like |automated matches |Rhodococcus sp. [TaxId: 104109]
d4dglc_ : (GLY199) (ASN262) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Protein kinase CK2, alpha subunit |Human (Homo sapiens) [TaxId: 9606]
d1i3qe1 : (GLU4) (SER59) [view usage] : c.52.3.1 |Restriction endonuclease-like |Eukaryotic RPB5 N-terminal domain |Eukaryotic RPB5 N-terminal domain |Eukaryotic RPB5 N-terminal domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2ie3a_ : (TYR11) (SER49) [view usage] : a.118.1.2 |alpha-alpha superhelix |ARM repeat |HEAT repeat |Constant regulatory domain of protein phosphatase 2a, pr65alpha |Human (Homo sapiens) [TaxId: 9606]
d3tj3a_ : (VAL127) (ALA168) [view usage] : a.118.1.0 |alpha-alpha superhelix |ARM repeat |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1l3eb_ : (ARG113) (LEU195) [view usage] : g.53.1.1 |TAZ domain |TAZ domain |TAZ domain |CREB-binding transcriptional adaptor protein CBP (p300) |Human (Homo sapiens) [TaxId: 9606]
d4e78a_ : (ILE405) (LEU466) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |Viral RNA polymerase |Hepatitis C virus [TaxId: 356411]
d2hyec3 : (PRO405) (GLY464) [view usage] : e.40.1.1 |Cullin homology domain |Cullin homology domain |Cullin homology domain |Cullin-4A |Human (Homo sapiens) [TaxId: 9606]
d3nd2a_ : (ALA595) (TYR636) [view usage] : a.118.1.1 |alpha-alpha superhelix |ARM repeat |Armadillo repeat |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2p1la_ : (TRP137) (LEU194) [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |Apoptosis regulator Bcl-xL |Human (Homo sapiens) [TaxId: 9606]
d1lujb_ : (SER10) (PRO56) [view usage] : a.161.1.1 |beta-catenin-interacting protein ICAT |beta-catenin-interacting protein ICAT |beta-catenin-interacting protein ICAT |beta-catenin-interacting protein ICAT |Human (Homo sapiens) [TaxId: 9606]
d3hilb_ : (THR907) (LEU936) [view usage] : a.60.1.0 |SAM domain-like |SAM/Pointed domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2xh7a1 : (GLN86) (SER137) [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1ciya3 : (ALA92) (LEU158) [view usage] : f.1.3.1 |Toxins' membrane translocation domains |delta-Endotoxin (insectocide), N-terminal domain |delta-Endotoxin (insectocide), N-terminal domain |delta-Endotoxin (insectocide), N-terminal domain |Bacillus thuringiensis, CRYIA (A) [TaxId: 1428]
d1otka_ : (ASN90) (ASN161) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Phenylacetic acid degradation protein PaaC |Escherichia coli [TaxId: 562]
d2pf4b_ : (VAL244) (THR281) [view usage] : a.118.1.2 |alpha-alpha superhelix |ARM repeat |HEAT repeat |Constant regulatory domain of protein phosphatase 2a, pr65alpha |Mouse (Mus musculus) [TaxId: 10090]
d3diha_ : (VAL2) (ASN62) [view usage] : a.133.1.2 |Phospholipase A2, PLA2 |Phospholipase A2, PLA2 |Vertebrate phospholipase A2 |automated matches |Vipera ammodytes [TaxId: 8705]
d2pkga1 : (LEU10) (SER49) [view usage] : a.118.1.2 |alpha-alpha superhelix |ARM repeat |HEAT repeat |Constant regulatory domain of protein phosphatase 2a, pr65alpha |Human (Homo sapiens) [TaxId: 9606]
d1ki1b1 : (GLY1316) (GLN1437) [view usage] : a.87.1.1 |DBL homology domain (DH-domain) |DBL homology domain (DH-domain) |DBL homology domain (DH-domain) |GEF of intersectin |Human (Homo sapiens) [TaxId: 9606]
d1lxka1 : (ASP367) (GLN436) [view usage] : a.102.3.2 |alpha/alpha toroid |Chondroitin AC/alginate lyase |Hyaluronate lyase-like catalytic, N-terminal domain |Hyaluronate lyase |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, c.69, a.118, a.102, d.144, b.40, a.25, c.52, a.1, a.45, f.1, a.74, i.8, d.54, a.87, a.133, a.60, e.40, a.7, a.47,
g.53, a.293, a.161