Tableau information
Concept source: d4dyya_ amino acid (a.a.) range (HIS13)(GLY159)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(HIS13) (ARG43) H1
(ASN50) (GLY77) H2
(SER95) (ASN125) H3
(PRO127) (GLY159) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -164.1° H2
H3 -170.8° 13.6° H3
H4 25.6° -168.6° -160.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3hx2s_ : (SER10) (LEU155) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |(Apo)ferritin |Human (Homo sapiens) [TaxId: 9606]
d4cmya_ : (LYS4) (MET147) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Chlorobaculum tepidum [TaxId: 1097]
d1wn0a1 : (PHE72) (GLN139) [view usage] : a.24.10.2 |Four-helical up-and-down bundle |Histidine-containing phosphotransfer domain, HPT domain |Phosphorelay protein-like |Histidine-containing phosphotransfer protein HP2 |Maize (Zea mays) [TaxId: 4577]
d3hx2k_ : (SER10) (LEU155) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |(Apo)ferritin |Human (Homo sapiens) [TaxId: 9606]
d3q8xa_ : (THR4) (VAL83) [view usage] : a.8.2.1 |immunoglobulin/albumin-binding domain-like |Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |automated matches |Streptococcus pyogenes [TaxId: 1314]
d3hx5v_ : (SER10) (LEU155) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |(Apo)ferritin |Human (Homo sapiens) [TaxId: 9606]
d4cmys_ : (LYS4) (LEU133) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Chlorobaculum tepidum [TaxId: 1097]
d4cmyv_ : (LYS4) (LEU133) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Chlorobaculum tepidum [TaxId: 1097]
d1jyba1 : (ARG8) (GLU144) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Rubrerythrin, N-terminal domain |Desulfovibrio vulgaris [TaxId: 881]
d3ok8a_ : (ALA2) (GLN210) [view usage] : a.238.1.0 |BAR/IMD domain-like |BAR/IMD domain-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3s90a1 : (ALA42) (GLU128) [view usage] : a.24.9.1 |Four-helical up-and-down bundle |alpha-catenin/vinculin-like |alpha-catenin/vinculin |Vinculin |Human (Homo sapiens) [TaxId: 9606]
d3hx5h_ : (SER10) (LEU155) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |(Apo)ferritin |Human (Homo sapiens) [TaxId: 9606]
d1lj2b_ : (SER208) (ASN307) [view usage] : h.1.13.2 |Parallel coiled-coil |Rotavirus nonstructural proteins |NSP3 C-terminal domain, NS34 |NSP3 C-terminal domain, NS34 |Simian rotavirus, SA11 [TaxId: 10922]
d2goma1 : (ILE105) (GLY162) [view usage] : a.7.17.1 |Spectrin repeat-like |Efb C-domain-like |Efb C-domain-like |Fibrinogen-binding protein Efb (Fib) |Staphylococcus aureus [TaxId: 1280]
d3hx5w_ : (SER10) (LEU155) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |(Apo)ferritin |Human (Homo sapiens) [TaxId: 9606]
d3hx2m_ : (SER10) (LEU155) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |(Apo)ferritin |Human (Homo sapiens) [TaxId: 9606]
d3hx2c_ : (THR11) (LEU155) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |(Apo)ferritin |Human (Homo sapiens) [TaxId: 9606]
d3hx5s_ : (SER10) (LEU155) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |(Apo)ferritin |Human (Homo sapiens) [TaxId: 9606]
d4cmyb_ : (LYS4) (LEU133) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Chlorobaculum tepidum [TaxId: 1097]
d3hx2r_ : (SER10) (LEU155) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |(Apo)ferritin |Human (Homo sapiens) [TaxId: 9606]
d3hx5i_ : (SER10) (LEU155) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |(Apo)ferritin |Human (Homo sapiens) [TaxId: 9606]
d3hx5g_ : (SER10) (LEU155) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |(Apo)ferritin |Human (Homo sapiens) [TaxId: 9606]
d3hx5c_ : (THR11) (LEU155) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |(Apo)ferritin |Human (Homo sapiens) [TaxId: 9606]
d1vs5t1 : (ALA6) (ALA86) [view usage] : a.7.6.1 |Spectrin repeat-like |Ribosomal protein S20 |Ribosomal protein S20 |Ribosomal protein S20 |Escherichia coli [TaxId: 562]
d3hx2p_ : (THR11) (LEU155) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |(Apo)ferritin |Human (Homo sapiens) [TaxId: 9606]
d1xrhc_ : (SER6) (GLY61) [view usage] : c.122.1.1 |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |L-sulfolactate dehydrogenase-like |Ureidoglycolate dehydrogenase AllD |Escherichia coli [TaxId: 562]
d3rf3a1 : (ALA42) (GLU128) [view usage] : a.24.9.1 |Four-helical up-and-down bundle |alpha-catenin/vinculin-like |alpha-catenin/vinculin |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3hx2h_ : (THR11) (LEU155) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |(Apo)ferritin |Human (Homo sapiens) [TaxId: 9606]
d3hx2f_ : (SER10) (LEU155) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |(Apo)ferritin |Human (Homo sapiens) [TaxId: 9606]
d1owaa_ : (TYR53) (LEU155) [view usage] : a.7.1.1 |Spectrin repeat-like |Spectrin repeat |Spectrin repeat |Spectrin alpha chain |Human (Homo sapiens) [TaxId: 9606]
d2gwwa1 : (LEU40) (GLU128) [view usage] : a.24.9.1 |Four-helical up-and-down bundle |alpha-catenin/vinculin-like |alpha-catenin/vinculin |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1urua_ : (THR34) (ARG242) [view usage] : a.238.1.1 |BAR/IMD domain-like |BAR/IMD domain-like |BAR domain |Amphiphysin |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d4dcnc_ : (THR121) (GLY311) [view usage] : a.238.1.2 |BAR/IMD domain-like |BAR/IMD domain-like |Arfaptin, Rac-binding fragment |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1xdoa1 : (GLU9) (GLN106) [view usage] : a.7.15.1 |Spectrin repeat-like |PPK N-terminal domain-like |PPK N-terminal domain-like |Polyphosphate kinase, PPK |Escherichia coli [TaxId: 562]
d3hx2a_ : (SER10) (LEU155) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |(Apo)ferritin |Human (Homo sapiens) [TaxId: 9606]
d2yb0e_ : (ASP39) (GLY169) [view usage] : a.204.1.0 |all-alpha NTP pyrophosphatases |all-alpha NTP pyrophosphatases |automated matches |automated matches |Leishmania major [TaxId: 5664]
d3hx2l_ : (SER10) (LEU155) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |(Apo)ferritin |Human (Homo sapiens) [TaxId: 9606]
d2ib0b_ : (GLU18) (LEU148) [view usage] : a.25.1.9 |Ferritin-like |Ferritin-like |Rv2844-like |Hypothetical protein Rv2844 |Mycobacterium tuberculosis [TaxId: 1773]
d2goxb1 : (ASP102) (GLN161) [view usage] : a.7.17.1 |Spectrin repeat-like |Efb C-domain-like |Efb C-domain-like |Fibrinogen-binding protein Efb (Fib) |Staphylococcus aureus [TaxId: 1280]
d3hx2d_ : (SER10) (LEU155) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |(Apo)ferritin |Human (Homo sapiens) [TaxId: 9606]
d3hx5d_ : (THR11) (LEU155) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |(Apo)ferritin |Human (Homo sapiens) [TaxId: 9606]
d1i5pa3 : (ASN106) (ASN194) [view usage] : f.1.3.1 |Toxins' membrane translocation domains |delta-Endotoxin (insectocide), N-terminal domain |delta-Endotoxin (insectocide), N-terminal domain |delta-Endotoxin (insectocide), N-terminal domain |Bacillus thuringiensis subsp. kurstaki, CRY2AA [TaxId: 29339]
d4i1qa_ : (LYS39) (LEU238) [view usage] : a.238.1.0 |BAR/IMD domain-like |BAR/IMD domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.25, c.122, f.1, a.24, a.8, a.7, a.204, a.238, h.1