Tableau information
Concept source: d1wkda_ amino acid (a.a.) range (CYS320)(PHE382)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(CYS320) (LYS325) H1
(ARG328) (GLY338) H2
(ILE340) (GLY368) H3
(PHE370) (PHE382) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 109.8° H2
H3 -118.9° -128.3° H3
H4 47.7° -65.3° 145.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4i7zb_ : (GLU115) (LEU157) [view usage] : f.32.1.1 |a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Subunit IV of the cytochrome b6f complex |Mastigocladus laminosus [TaxId: 83541]
d1cvia_ : (LYS1153) (ARG1225) [view usage] : c.60.1.2 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Histidine acid phosphatase |Prostatic acid phosphatase |Human (Homo sapiens) [TaxId: 9606]
d3u95a2 : (ASP267) (PRO333) [view usage] : d.162.1.2 |LDH C-terminal domain-like |LDH C-terminal domain-like |AglA-like glucosidase |automated matches |Thermotoga neapolitana [TaxId: 309803]
d1gxla_ : (LYS475) (LEU538) [view usage] : d.215.1.1 |Smc hinge domain |Smc hinge domain |Smc hinge domain |Smc hinge domain |Thermotoga maritima [TaxId: 2336]
d4n4ne_ : (THR192) (SER227) [view usage] : a.138.1.3 |Multiheme cytochromes |Multiheme cytochromes |Di-heme elbow motif |automated matches |Nitrosomonas europaea [TaxId: 915]
d3u43a_ : (SER6) (ASP51) [view usage] : a.28.2.1 |Acyl carrier protein-like |Colicin E immunity proteins |Colicin E immunity proteins |automated matches |Escherichia coli [TaxId: 562]
d1gxga_ : (SER6) (ASP50) [view usage] : a.28.2.1 |Acyl carrier protein-like |Colicin E immunity proteins |Colicin E immunity proteins |ImmE8 (Im8) |Escherichia coli [TaxId: 562]
d3k9va_ : (ALA235) (HIS310) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1yqya2 : (LYS303) (ASP363) [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |Anthrax toxin lethal factor, middle domain |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d1gxld_ : (ILE482) (LEU538) [view usage] : d.215.1.1 |Smc hinge domain |Smc hinge domain |Smc hinge domain |Smc hinge domain |Thermotoga maritima [TaxId: 2336]
d3k9ya_ : (PHE249) (GLN307) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1csna_ : (THR225) (ASN286) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Casein kinase-1, CK1 |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
d1fs2b1 : (PRO86) (LYS137) [view usage] : a.157.1.1 |Skp1 dimerisation domain-like |Skp1 dimerisation domain-like |Skp1 dimerisation domain-like |Cyclin A/CDK2-associated p45, Skp1 |Human (Homo sapiens) [TaxId: 9606]
d3u95b2 : (ASP267) (HIS332) [view usage] : d.162.1.2 |LDH C-terminal domain-like |LDH C-terminal domain-like |AglA-like glucosidase |automated matches |Thermotoga neapolitana [TaxId: 309803]
d4hokm_ : (LYS221) (GLY281) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4gjqb_ : (THR20) (LYS87) [view usage] : a.224.1.1 |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Glycolipid transfer protein, GLTP |Human (Homo sapiens) [TaxId: 9606]
d3k9yb_ : (GLU232) (HIS310) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4jibd_ : (LEU770) (LYS814) [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1nd6b_ : (LYS1152) (LEU1225) [view usage] : c.60.1.2 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Histidine acid phosphatase |Prostatic acid phosphatase |Human (Homo sapiens) [TaxId: 9606]
d1rqfe_ : (HIS45) (GLY104) [view usage] : g.41.4.1 |Rubredoxin-like |Casein kinase II beta subunit |Casein kinase II beta subunit |Casein kinase II beta subunit |African clawed frog (Xenopus laevis) [TaxId: 8355]
d2p1aa1 : (PHE2) (THR74) [view usage] : a.213.1.2 |DinB/YfiT-like putative metalloenzymes |DinB/YfiT-like putative metalloenzymes |DinB-like |Hypothetical protein BCE2162 |Bacillus cereus [TaxId: 1396]
d3lz9a1 : (ASP166) (ILE214) [view usage] : a.102.4.0 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |automated matches |automated matches |Tobacco (Nicotiana tabacum) [TaxId: 4097]
d1jogd_ : (LEU8) (TYR78) [view usage] : a.24.16.2 |Four-helical up-and-down bundle |Nucleotidyltransferase substrate binding subunit/domain |Family 1 bi-partite nucleotidyltransferase subunit |Hypothetical protein HI0074 |Haemophilus influenzae [TaxId: 727]
d1iq8a1 : (CYS281) (HIS339) [view usage] : c.1.20.1 |TIM beta/alpha-barrel |tRNA-guanine transglycosylase |tRNA-guanine transglycosylase |Archaeosine tRNA-guanine transglycosylase, N-terminal domain |Pyrococcus horikoshii [TaxId: 53953]
d2xzmm_ : (THR62) (ASN87) [view usage] : i.1.1.3 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Small subunit |Eukaryotic, cytoplasmic (40S subunit) |Tetrahymena thermophila [TaxId: 5911]
d4hokg_ : (LYS221) (GLY281) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1j2ba2 : (CYS281) (PRO340) [view usage] : c.1.20.1 |TIM beta/alpha-barrel |tRNA-guanine transglycosylase |tRNA-guanine transglycosylase |Archaeosine tRNA-guanine transglycosylase, N-terminal domain |Pyrococcus horikoshii [TaxId: 53953]
d4pkqa1 : (LYS303) (SER364) [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d1enua_ : (CYS320) (ARG380) [view usage] : c.1.20.1 |TIM beta/alpha-barrel |tRNA-guanine transglycosylase |tRNA-guanine transglycosylase |Queosine tRNA-guanine transglycosylase |Zymomonas mobilis [TaxId: 542]
d3unta_ : (CYS320) (ALA383) [view usage] : c.1.20.1 |TIM beta/alpha-barrel |tRNA-guanine transglycosylase |tRNA-guanine transglycosylase |Queosine tRNA-guanine transglycosylase |Zymomonas mobilis [TaxId: 542]
d4pkva1 : (ASP305) (VAL362) [view usage] : d.166.1.1 |ADP-ribosylation |ADP-ribosylation |ADP-ribosylating toxins |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d4gd0a_ : (CYS320) (ALA383) [view usage] : c.1.20.1 |TIM beta/alpha-barrel |tRNA-guanine transglycosylase |tRNA-guanine transglycosylase |Queosine tRNA-guanine transglycosylase |Zymomonas mobilis [TaxId: 542]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, a.104, i.1, a.102, a.211, d.144, d.166, c.60, d.162, a.138, a.224, a.24, a.28, g.41, a.157, d.215, a.213, f.32