Tableau information
Concept source: d2gm7d_ amino acid (a.a.) range (ASN105)(SER166)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASN105) (LEU121) H1
(GLY123) (ARG144) H2
(HIS145) (GLU151) H3
(HIS155) (SER166) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -139.5° H2
H3 -135.9° 43.4° H3
H4 20.9° -126.9° -145.6°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1mhyb_ : (SER228) (LEU301) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Methane monooxygenase hydrolase beta subunit |Methylosinus trichosporium [TaxId: 426]
d4auqa_ : (ASP87) (MET147) [view usage] : d.20.1.1 |UBC-like |UBC-like |UBC-related |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1st6a5 : (GLY535) (LYS646) [view usage] : a.24.9.1 |Four-helical up-and-down bundle |alpha-catenin/vinculin-like |alpha-catenin/vinculin |Vinculin |Chicken (Gallus gallus) [TaxId: 9031]
d3hlxa_ : (LEU118) (TYR197) [view usage] : a.132.1.4 |Heme oxygenase-like |Heme oxygenase-like |PqqC-like |Coenzyme PQQ synthesis protein C, PqqC |Klebsiella pneumoniae [TaxId: 272620]
d1irma_ : (THR108) (PHE167) [view usage] : a.132.1.1 |Heme oxygenase-like |Heme oxygenase-like |Eukaryotic type heme oxygenase |Heme oxygenase-1 (HO-1) |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3n20a_ : (TRP167) (GLN237) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouA |Pseudomonas sp. [TaxId: 320855]
d1mabb1 : (ASP359) (SER415) [view usage] : a.69.1.1 |Left-handed superhelix |C-terminal domain of alpha and beta subunits of F1 ATP synthase |C-terminal domain of alpha and beta subunits of F1 ATP synthase |F1 ATP synthase beta subunit, domain 3 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3t2ca_ : (ASP323) (ALA366) [view usage] : d.280.1.1 |Sulfolobus fructose-1,6-bisphosphatase-like |Sulfolobus fructose-1,6-bisphosphatase-like |Sulfolobus fructose-1,6-bisphosphatase-like |automated matches |Thermoproteus neutrophilus [TaxId: 444157]
d2gm7a1 : (ASN105) (SER166) [view usage] : a.132.1.3 |Heme oxygenase-like |Heme oxygenase-like |TENA/THI-4 |TenA homolog PAE0170 |Pyrobaculum aerophilum [TaxId: 13773]
d1rtwa_ : (TRP100) (SER158) [view usage] : a.132.1.3 |Heme oxygenase-like |Heme oxygenase-like |TENA/THI-4 |Putative transcriptional activator PF1337 |Pyrococcus furiosus [TaxId: 2261]
d1jtsc_ : (PRO108) (ILE166) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Escherichia coli, Dps [TaxId: 562]
d2b0ja1 : (PRO278) (LYS341) [view usage] : a.100.1.11 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |HMD dimerization domain-like |5,10-methenyltetrahydromethanopterin hydrogenase, HMD |Methanocaldococcus jannaschii [TaxId: 2190]
d2jkva2 : (SER370) (HIS435) [view usage] : a.100.1.0 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2yjma_ : (SER107) (LEU163) [view usage] : a.184.1.1 |TorD-like |TorD-like |TorD-like |automated matches |Archaeoglobus fulgidus [TaxId: 2234]
d1rtwc_ : (TRP100) (TRP156) [view usage] : a.132.1.3 |Heme oxygenase-like |Heme oxygenase-like |TENA/THI-4 |Putative transcriptional activator PF1337 |Pyrococcus furiosus [TaxId: 2261]
d1we1d_ : (SER99) (ASP162) [view usage] : a.132.1.1 |Heme oxygenase-like |Heme oxygenase-like |Eukaryotic type heme oxygenase |Heme oxygenase-1 (HO-1) |Synechocystis sp. [TaxId: 1143]
d3rnca_ : (GLU166) (SER232) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouA |Pseudomonas sp. [TaxId: 320855]
d1otwa_ : (LEU118) (LEU180) [view usage] : a.132.1.4 |Heme oxygenase-like |Heme oxygenase-like |PqqC-like |Coenzyme PQQ synthesis protein C, PqqC |Klebsiella pneumoniae [TaxId: 573]
d2gm7d_ : (ASN105) (SER166) [view usage] : a.132.1.0 |Heme oxygenase-like |Heme oxygenase-like |automated matches |automated matches |Pyrobaculum aerophilum [TaxId: 178306]
d1kq3a_ : (THR152) (GLU210) [view usage] : e.22.1.2 |Dehydroquinate synthase-like |Dehydroquinate synthase-like |Iron-containing alcohol dehydrogenase |Glycerol dehydrogenase |Thermotoga maritima [TaxId: 2336]
d1s1ho_ : (LYS69) (TYR127) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1vjxa_ : (THR78) (THR145) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Hypothetical protein TM1526 |Thermotoga maritima [TaxId: 2336]
d2jkvf2 : (SER370) (HIS435) [view usage] : a.100.1.0 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1wtyb_ : (LEU4) (THR85) [view usage] : a.24.16.2 |Four-helical up-and-down bundle |Nucleotidyltransferase substrate binding subunit/domain |Family 1 bi-partite nucleotidyltransferase subunit |Probable nucleotidyltransferase subunit TTHA0048 |Thermus thermophilus [TaxId: 274]
d1m4ra_ : (GLY76) (SER130) [view usage] : a.26.1.3 |4-helical cytokines |4-helical cytokines |Interferons/interleukin-10 (IL-10) |Interleukin-22 (IL-22) |Human (Homo sapiens) [TaxId: 9606]
d1rtwb_ : (TRP100) (TRP156) [view usage] : a.132.1.3 |Heme oxygenase-like |Heme oxygenase-like |TENA/THI-4 |Putative transcriptional activator PF1337 |Pyrococcus furiosus [TaxId: 2261]
d4g70a_ : (LEU275) (PHE356) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Bacterial ba3 type cytochrome c oxidase subunit I |Thermus thermophilus [TaxId: 274]
d3n1ya_ : (TRP167) (SER232) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouA |Pseudomonas sp. [TaxId: 320855]
d1ufba_ : (ARG3) (TYR86) [view usage] : a.24.16.3 |Four-helical up-and-down bundle |Nucleotidyltransferase substrate binding subunit/domain |HEPN domain |Hypothetical protein TT1696 |Thermus thermophilus [TaxId: 274]
d3sgha_ : (PRO108) (GLY187) [view usage] : a.118.8.0 |alpha-alpha superhelix |TPR-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 818]
d2gm7b_ : (ASN105) (SER166) [view usage] : a.132.1.0 |Heme oxygenase-like |Heme oxygenase-like |automated matches |automated matches |Pyrobaculum aerophilum [TaxId: 178306]
d2fgza3 : (ASP750) (HIS779) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Pullulanase PulA |Klebsiella pneumoniae [TaxId: 573]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, i.1, a.118, e.22, a.132, d.20, a.25, f.24, a.100, a.24, a.26, a.184, a.69, d.280