Protein Concepts Dictionary

Tableau information

Concept source:  d1bdha1  amino acid (a.a.) range (ILE4)(VAL56)

nSSEs in this Concept: 4

String of secondary struct.elems. (SSEs) defining this concept: HHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ILE4)   (ASN12) H1
	   (THR15)   (ASN23) H2
	   (ALA29)   (HIS44) H3
	   (VAL50)   (VAL56) H4

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                          
H2      103.7°   H2                   
H3      127.0°  -91.3°   H3            
H4      -98.1°  -93.2°  132.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1rzra1 :     (THR4)   (SER57)   [view usage] : a.35.1.5 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |GalR/LacI-like bacterial regulator |Glucose-resistance amylase regulator CcpA, N-terminal domain |Bacillus megaterium [TaxId: 1404]
 d1jfsa1 :     (LYS5)   (LYS55)   [view usage] : a.35.1.5 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |GalR/LacI-like bacterial regulator |Purine repressor (PurR), N-terminal domain |Escherichia coli [TaxId: 562]
 d1efaa1 :     (THR5)   (ALA57)   [view usage] : a.35.1.5 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |GalR/LacI-like bacterial regulator |Lac repressor (LacR), N-terminal domain |Escherichia coli [TaxId: 562]
 d4mdoa_ :   (PRO247)  (ASP301)   [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Humicola grisea [TaxId: 5528]
 d1rzrd1 :     (THR4)   (SER57)   [view usage] : a.35.1.5 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |GalR/LacI-like bacterial regulator |Glucose-resistance amylase regulator CcpA, N-terminal domain |Bacillus megaterium [TaxId: 1404]
 d1vpwa1 :     (ILE4)   (ASN57)   [view usage] : a.35.1.5 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |GalR/LacI-like bacterial regulator |Purine repressor (PurR), N-terminal domain |Escherichia coli [TaxId: 562]
 d2bjca1 :     (THR5)   (LEU62)   [view usage] : a.35.1.5 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |GalR/LacI-like bacterial regulator |Lac repressor (LacR), N-terminal domain |Escherichia coli [TaxId: 562]
 d1bdha1 :     (ILE4)   (VAL56)   [view usage] : a.35.1.5 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |GalR/LacI-like bacterial regulator |Purine repressor (PurR), N-terminal domain |Escherichia coli [TaxId: 562]
 d1bdia1 :     (THR3)   (VAL56)   [view usage] : a.35.1.5 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |GalR/LacI-like bacterial regulator |Purine repressor (PurR), N-terminal domain |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1,    a.35