Tableau information
Concept source: d4eg6a2 amino acid (a.a.) range (THR635)(SER714)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR635) (PRO659) H1
(ILE661) (ALA683) H2
(ALA683) (VAL688) H3
(ASP691) (SER714) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -167.4° H2
H3 -134.8° 42.1° H3
H4 4.4° -167.1° -139.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3q0ma_ : (ASN1122) (LEU1164) [view usage] : a.118.1.8 |alpha-alpha superhelix |ARM repeat |Pumilio repeat |Pumilio 1 |Human (Homo sapiens) [TaxId: 9606]
d1l0ka_ : (SER117) (ARG154) [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]
d4phoc_ : (TRP37) (ASP158) [view usage] : h.4.4.1 |Antiparallel coiled-coil |Bacterial hemolysins |Hemolysin E (HlyE, ClyA, SheA) |automated matches |Escherichia coli [TaxId: 83333]
d3krfd_ : (GLY105) (GLY197) [view usage] : a.128.1.0 |Terpenoid synthases |Terpenoid synthases |automated matches |automated matches |Mentha x [TaxId: 34256]
d3fyec_ : (PRO176) (ARG257) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Bacterial aa3 type cytochrome c oxidase subunit I |Rhodobacter sphaeroides [TaxId: 1063]
d3dw8a_ : (GLY190) (LEU235) [view usage] : a.118.1.2 |alpha-alpha superhelix |ARM repeat |HEAT repeat |Constant regulatory domain of protein phosphatase 2a, pr65alpha |Human (Homo sapiens) [TaxId: 9606]
d4gyve_ : (GLU538) (THR637) [view usage] : a.87.1.0 |DBL homology domain (DH-domain) |DBL homology domain (DH-domain) |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1lvfa_ : (PRO6) (SER109) [view usage] : a.47.2.1 |STAT-like |t-snare proteins |t-snare proteins |Syntaxin 6, SNAP-25 homolog |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3q0mb_ : (ASN1122) (GLU1165) [view usage] : a.118.1.8 |alpha-alpha superhelix |ARM repeat |Pumilio repeat |Pumilio 1 |Human (Homo sapiens) [TaxId: 9606]
d2yjyb_ : (ALA1121) (TYR1168) [view usage] : a.118.1.8 |alpha-alpha superhelix |ARM repeat |Pumilio repeat |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4fe3a_ : (THR66) (GLY125) [view usage] : c.108.1.21 |HAD-like |HAD-like |Pyrimidine 5'-nucleotidase (UMPH-1) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d4i1qb_ : (GLU41) (GLU194) [view usage] : a.238.1.0 |BAR/IMD domain-like |BAR/IMD domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3fgaa_ : (LYS307) (GLY357) [view usage] : a.118.1.2 |alpha-alpha superhelix |ARM repeat |HEAT repeat |Constant regulatory domain of protein phosphatase 2a, pr65alpha |Mouse (Mus musculus) [TaxId: 10090]
d1m8za_ : (ASN1122) (LEU1164) [view usage] : a.118.1.8 |alpha-alpha superhelix |ARM repeat |Pumilio repeat |Pumilio 1 |Human (Homo sapiens) [TaxId: 9606]
d1sjja_ : (LYS414) (ASP535) [view usage] : i.15.1.1 |Muscle protein complexes |Muscle protein complexes |Muscle protein complexes |Actinin |Chicken (Gallus gallus) [TaxId: 9031]
d2ftua1 : (ARG17) (ALA113) [view usage] : a.13.1.1 |RAP domain-like |RAP domain-like |RAP domain |alpha-2-Macroglobulin receptor associated protein (RAP) |Human (Homo sapiens) [TaxId: 9606]
d1h9fa_ : (ASP4) (ARG48) [view usage] : a.140.1.1 |LEM/SAP HeH motif |LEM domain |LEM domain |Thymopoietin, LAP2 |Human (Homo sapiens) [TaxId: 9606]
d4hxka_ : (MET107) (ASN162) [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1qvxa_ : (LEU973) (ARG1051) [view usage] : a.24.14.1 |Four-helical up-and-down bundle |FAT domain of focal adhesion kinase |FAT domain of focal adhesion kinase |FAT domain of focal adhesion kinase |Chicken (Gallus gallus) [TaxId: 9031]
d3nyla_ : (ASP354) (VAL435) [view usage] : a.47.4.1 |STAT-like |CAPPD, an extracellular domain of amyloid beta A4 protein |CAPPD, an extracellular domain of amyloid beta A4 protein |CAPPD, an extracellular domain of amyloid beta A4 protein |Human (Homo sapiens) [TaxId: 9606]
d1rqja_ : (GLY127) (GLY219) [view usage] : a.128.1.1 |Terpenoid synthases |Terpenoid synthases |Isoprenyl diphosphate synthases |Farnesyl diphosphate synthase (geranyltranstransferase) |Escherichia coli [TaxId: 562]
d1jogd_ : (PHE80) (ARG142) [view usage] : a.24.16.2 |Four-helical up-and-down bundle |Nucleotidyltransferase substrate binding subunit/domain |Family 1 bi-partite nucleotidyltransferase subunit |Hypothetical protein HI0074 |Haemophilus influenzae [TaxId: 727]
d3q0qa_ : (ASN1002) (TYR1048) [view usage] : a.118.1.8 |alpha-alpha superhelix |ARM repeat |Pumilio repeat |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1iq0a1 : (ASP511) (GLY585) [view usage] : a.27.1.1 |Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |Arginyl-tRNA synthetase (ArgRS) |Thermus thermophilus [TaxId: 274]
d2bkna1 : (SER13) (GLY105) [view usage] : a.7.12.1 |Spectrin repeat-like |PhoU-like |PhoU-like |Hypothetical protein PH0236, N-terminal domain |Pyrococcus horikoshii [TaxId: 53953]
d2ehod1 : (GLN93) (PHE146) [view usage] : a.278.1.3 |GINS helical bundle-like |GINS helical bundle-like |PSF3 C-terminal domain-like |GINS complex subunit 3, PSF3 |Human (Homo sapiens) [TaxId: 9606]
d4d8ga_ : (GLY215) (GLY304) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |automated matches |Chlamydia trachomatis [TaxId: 813]
d1tjfa_ : (PHE135) (GLN207) [view usage] : a.192.1.1 |N-terminal domain of adenylylcyclase associated protein, CAP |N-terminal domain of adenylylcyclase associated protein, CAP |N-terminal domain of adenylylcyclase associated protein, CAP |N-terminal domain of adenylylcyclase associated protein, CAP |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
d1rqga1 : (GLU442) (GLU505) [view usage] : a.27.1.1 |Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |Methionyl-tRNA synthetase (MetRS) |Pyrococcus abyssi [TaxId: 29292]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.118, c.108, a.128, i.15, d.2, a.25, f.24, a.29, a.87, a.24, h.4, a.27, a.278, a.7, a.47, a.192, a.140, a.238, a.13