Tableau information
Concept source: d1fx0a1 amino acid (a.a.) range (ASP404)(PRO470)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP404) (LYS422) H1
(THR430) (GLY444) H2
(GLY444) (GLU450) H3
(VAL454) (PRO470) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 159.4° H2
H3 95.1° -65.7° H3
H4 -62.3° 127.4° 138.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2r9va3 : (PRO405) (HIS466) [view usage] : a.69.1.0 |Left-handed superhelix |C-terminal domain of alpha and beta subunits of F1 ATP synthase |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d1f6va_ : (SER52) (SER86) [view usage] : a.49.1.1 |C-terminal domain of B transposition protein |C-terminal domain of B transposition protein |C-terminal domain of B transposition protein |C-terminal domain of B transposition protein |Bacteriophage Mu [TaxId: 10677]
d2erba_ : (LEU73) (ASP118) [view usage] : a.39.2.0 |EF Hand-like |Insect pheromone/odorant-binding proteins |automated matches |automated matches |Anopheles gambiae [TaxId: 180454]
d2jiza3 : (ALA412) (GLN477) [view usage] : a.69.1.0 |Left-handed superhelix |C-terminal domain of alpha and beta subunits of F1 ATP synthase |automated matches |automated matches |Cow (Bos taurus) [TaxId: 9913]
d1m12a_ : (TYR4) (GLY55) [view usage] : a.64.1.1 |Saposin-like |Saposin |NKL-like |Saposin C |Human (Homo sapiens) [TaxId: 9606]
d4lacb_ : (GLU72) (SER142) [view usage] : a.268.1.1 |PTPA-like |PTPA-like |PTPA-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1rj4a_ : (ASN2) (SER60) [view usage] : a.29.6.1 |Bromodomain-like |Plant invertase/pectin methylesterase inhibitor |Plant invertase/pectin methylesterase inhibitor |Invertase inhibitor |Tobacco (Nicotiana tabacum) [TaxId: 4097]
d1vljb_ : (SER342) (ALA394) [view usage] : e.22.1.2 |Dehydroquinate synthase-like |Dehydroquinate synthase-like |Iron-containing alcohol dehydrogenase |NADH-dependent butanol dehydrogenase A (TM0820) |Thermotoga maritima [TaxId: 2336]
d4dzwa_ : (SER3) (TYR94) [view usage] : a.128.1.0 |Terpenoid synthases |Terpenoid synthases |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
d1ug3b1 : (VAL1337) (MET1388) [view usage] : a.118.1.14 |alpha-alpha superhelix |ARM repeat |MIF4G domain-like |Eukaryotic initiation factor eIF4G |Human (Homo sapiens) [TaxId: 9606]
d4bhta1 : (SER6) (GLU56) [view usage] : c.58.1.0 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |automated matches |automated matches |Escherichia coli [TaxId: 562]
d2cj8b_ : (ASN5) (SER63) [view usage] : a.29.6.1 |Bromodomain-like |Plant invertase/pectin methylesterase inhibitor |Plant invertase/pectin methylesterase inhibitor |automated matches |Tobacco (Nicotiana tabacum) [TaxId: 4097]
d2qe7a3 : (THR406) (ARG465) [view usage] : a.69.1.0 |Left-handed superhelix |C-terminal domain of alpha and beta subunits of F1 ATP synthase |automated matches |automated matches |Bacillus sp. [TaxId: 90973]
d3k1ea_ : (LEU73) (SER117) [view usage] : a.39.2.0 |EF Hand-like |Insect pheromone/odorant-binding proteins |automated matches |automated matches |Yellow fever mosquito (Aedes aegypti) [TaxId: 7159]
d1o9kb_ : (SER644) (ASN716) [view usage] : a.74.1.3 |Cyclin-like |Cyclin-like |Retinoblastoma tumor suppressor domains |Retinoblastoma tumor suppressor domains |Human (Homo sapiens) [TaxId: 9606]
d3qbpb_ : (GLU52) (GLY129) [view usage] : a.127.1.0 |L-aspartase-like |L-aspartase-like |automated matches |automated matches |Mycobacterium marinum [TaxId: 216594]
d3ogna_ : (LEU73) (ASP118) [view usage] : a.39.2.0 |EF Hand-like |Insect pheromone/odorant-binding proteins |automated matches |automated matches |Culex quinquefasciatus [TaxId: 7176]
d1s2xa_ : (ASN97) (LYS177) [view usage] : a.47.3.1 |STAT-like |Cag-Z |Cag-Z |Cag-Z |Helicobacter pylori [TaxId: 210]
d1ztsa_ : (PRO6) (ASN72) [view usage] : a.229.1.1 |Hypothetical protein YqbG |Hypothetical protein YqbG |Hypothetical protein YqbG |Hypothetical protein YqbG |Bacillus subtilis [TaxId: 1423]
d1ijxd_ : (GLN30) (LEU107) [view usage] : a.141.1.1 |Frizzled cysteine-rich domain |Frizzled cysteine-rich domain |Frizzled cysteine-rich domain |Secreted Frizzled-related protein 3 (SFRP-3;fzb) |Mouse (Mus musculus) [TaxId: 10090]
d1ug3a1 : (VAL1337) (MET1388) [view usage] : a.118.1.14 |alpha-alpha superhelix |ARM repeat |MIF4G domain-like |Eukaryotic initiation factor eIF4G |Human (Homo sapiens) [TaxId: 9606]
d2h5nc_ : (SER14) (ILE67) [view usage] : a.287.1.2 |TerB-like |TerB-like |PG1108-like |Hypothetical protein PG1108 |Porphyromonas gingivalis [TaxId: 837]
d1yzxa_ : (SER98) (GLY146) [view usage] : c.47.1.13 |Thioredoxin fold |Thioredoxin-like |DsbA-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1bu2a2 : (SER194) (ALA245) [view usage] : a.74.1.1 |Cyclin-like |Cyclin-like |Cyclin |Viral cyclin |Herpesvirus saimiri [TaxId: 10381]
d1yovc_ : (ASN418) (TYR485) [view usage] : c.111.1.2 |Activating enzymes of the ubiquitin-like proteins |Activating enzymes of the ubiquitin-like proteins |Ubiquitin activating enzymes (UBA) |Amyloid beta precursor protein-binding protein 1, APPBP1 |Human (Homo sapiens) [TaxId: 9606]
d1yhma_ : (ALA2) (GLY103) [view usage] : a.128.1.0 |Terpenoid synthases |Terpenoid synthases |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
d1guxb_ : (THR645) (ASN716) [view usage] : a.74.1.3 |Cyclin-like |Cyclin-like |Retinoblastoma tumor suppressor domains |Retinoblastoma tumor suppressor domains |Human (Homo sapiens) [TaxId: 9606]
d3pomb2 : (THR645) (ASN716) [view usage] : a.74.1.3 |Cyclin-like |Cyclin-like |Retinoblastoma tumor suppressor domains |Retinoblastoma tumor suppressor domains |Human (Homo sapiens) [TaxId: 9606]
d1xn8a_ : (ASP7) (ASN72) [view usage] : a.229.1.1 |Hypothetical protein YqbG |Hypothetical protein YqbG |Hypothetical protein YqbG |Hypothetical protein YqbG |Bacillus subtilis [TaxId: 1423]
d3poma2 : (SER644) (LYS715) [view usage] : a.74.1.3 |Cyclin-like |Cyclin-like |Retinoblastoma tumor suppressor domains |Retinoblastoma tumor suppressor domains |Human (Homo sapiens) [TaxId: 9606]
d1fx0a1 : (ASP404) (PRO470) [view usage] : a.69.1.1 |Left-handed superhelix |C-terminal domain of alpha and beta subunits of F1 ATP synthase |C-terminal domain of alpha and beta subunits of F1 ATP synthase |F1 ATP synthase alpha subunit, domain 3 |Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]
d3r3ja1 : (ASP67) (GLU117) [view usage] : c.58.1.0 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |automated matches |automated matches |Plasmodium falciparum [TaxId: 36329]
d3hd5a_ : (TYR100) (GLY139) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Bordetella parapertussis [TaxId: 519]
d2y6wa_ : (TRP93) (LEU150) [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3n7ha_ : (LEU73) (SER117) [view usage] : a.39.2.0 |EF Hand-like |Insect pheromone/odorant-binding proteins |automated matches |automated matches |Anopheles gambiae [TaxId: 180454]
d1bmfa1 : (ALA412) (GLN477) [view usage] : a.69.1.1 |Left-handed superhelix |C-terminal domain of alpha and beta subunits of F1 ATP synthase |C-terminal domain of alpha and beta subunits of F1 ATP synthase |F1 ATP synthase alpha subunit, domain 3 |Cow (Bos taurus) [TaxId: 9913]
d1miua1 : (LYS2518) (SER2588) [view usage] : a.170.1.1 |BRCA2 helical domain |BRCA2 helical domain |BRCA2 helical domain |BRCA2 helical domain |Mouse (Mus musculus) [TaxId: 10090]
d2phga1 : (ARG112) (ARG169) [view usage] : a.74.1.2 |Cyclin-like |Cyclin-like |Transcription factor IIB (TFIIB), core domain |Transcription factor IIB (TFIIB), core domain |Human (Homo sapiens) [TaxId: 9606]
d4nyza_ : (SER413) (TRP460) [view usage] : e.8.1.0 |DNA/RNA polymerases |DNA/RNA polymerases |automated matches |automated matches |Mengo virus [TaxId: 12107]
d1iyjb1 : (LYS2527) (SER2597) [view usage] : a.170.1.1 |BRCA2 helical domain |BRCA2 helical domain |BRCA2 helical domain |BRCA2 helical domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, a.118, a.128, a.127, e.22, c.47, c.111, a.39, c.58, a.29, f.1, a.74, a.69, a.64, a.47, a.268, a.49, a.229, a.141, a.287,
a.170