Tableau information
Concept source: d2qeef_ amino acid (a.a.) range (ASN330)(VAL412)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASN330) (GLY346) H1
(GLN361) (ALA387) H2
(GLU393) (LEU403) H3
(ARG406) (VAL412) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -41.9° H2
H3 113.2° 135.8° H3
H4 63.1° 98.1° -51.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1kiaa_ : (ASP19) (ALA42) [view usage] : c.66.1.5 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Glycine N-methyltransferase |Glycine N-methyltransferase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3weka_ : (GLU165) (GLY227) [view usage] : a.128.1.2 |Terpenoid synthases |Terpenoid synthases |Squalene synthase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1twaj_ : (TRP18) (ARG62) [view usage] : a.4.11.1 |DNA/RNA-binding 3-helical bundle |RNA polymerase subunit RPB10 |RNA polymerase subunit RPB10 |RNA polymerase subunit RPB10 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4b8nb_ : (LEU41) (LEU70) [view usage] : d.120.1.0 |Cytochrome b5-like heme/steroid binding domain |Cytochrome b5-like heme/steroid binding domain |automated matches |automated matches |Ostreococcus tauri virus 2 [TaxId: 696472]
d3dyva_ : (HIS126) (PRO179) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Lactobacillus rhamnosus [TaxId: 486408]
d3dd5a_ : (ASP188) (ARG222) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Glomerella cingulata [TaxId: 5457]
d1on3a2 : (GLY441) (GLY485) [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |Methylmalonyl-CoA carboxyltransferase (transcarboxylase 12S) |Propionibacterium freudenreichii [TaxId: 1744]
d1qgia_ : (PRO3) (ASP39) [view usage] : d.2.1.7 |Lysozyme-like |Lysozyme-like |Chitosanase |Endochitosanase |Bacillus circulans [TaxId: 1397]
d1pfra_ : (CYS268) (TRP338) [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Ribonucleotide reductase R2 |Escherichia coli [TaxId: 562]
d1z8hd_ : (GLU166) (ASN203) [view usage] : c.23.10.6 |Flavodoxin-like |SGNH hydrolase |Hypothetical protein alr1529 |Hypothetical protein alr1529 |Nostoc sp. PCC 7120 [TaxId: 103690]
d2ee4a_ : (ASP160) (PHE202) [view usage] : a.116.1.0 |GTPase activation domain, GAP |GTPase activation domain, GAP |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2cjea_ : (PRO10) (LEU64) [view usage] : a.204.1.0 |all-alpha NTP pyrophosphatases |all-alpha NTP pyrophosphatases |automated matches |automated matches |Leishmania major [TaxId: 5664]
d1i3qj_ : (TRP18) (ARG62) [view usage] : a.4.11.1 |DNA/RNA-binding 3-helical bundle |RNA polymerase subunit RPB10 |RNA polymerase subunit RPB10 |RNA polymerase subunit RPB10 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2x40a1 : (ILE260) (ALA307) [view usage] : c.1.8.7 |TIM beta/alpha-barrel |(Trans)glycosidases |NagZ-like |automated matches |Thermotoga neapolitana [TaxId: 309803]
d4a5gb_ : (CYS13) (ALA73) [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |automated matches |Radish (Raphanus sativus) [TaxId: 3726]
d2yb0a_ : (GLY11) (LEU64) [view usage] : a.204.1.0 |all-alpha NTP pyrophosphatases |all-alpha NTP pyrophosphatases |automated matches |automated matches |Leishmania major [TaxId: 5664]
d1to6a_ : (ALA202) (LEU238) [view usage] : c.141.1.1 |Glycerate kinase I |Glycerate kinase I |Glycerate kinase I |Glycerate kinase GlxK |Neisseria meningitidis, (serogroup A) [TaxId: 487]
d2d05a_ : (PRO3) (ASP39) [view usage] : d.2.1.7 |Lysozyme-like |Lysozyme-like |Chitosanase |Endochitosanase |Bacillus circulans [TaxId: 1397]
d4eraa_ : (GLY275) (PHE330) [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |2-amino-3-carboxymuconate 6-semialdehyde decarboxylase NbaD |Pseudomonas fluorescens [TaxId: 294]
d3dkra_ : (LEU127) (PRO179) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Lactobacillus rhamnosus [TaxId: 486408]
d2l3ya_ : (THR26) (ASN66) [view usage] : a.26.1.0 |4-helical cytokines |4-helical cytokines |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2ij3a_ : (SER72) (HIS116) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
d3weia_ : (GLU165) (GLY227) [view usage] : a.128.1.2 |Terpenoid synthases |Terpenoid synthases |Squalene synthase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3q2za_ : (SER164) (GLY227) [view usage] : a.128.1.2 |Terpenoid synthases |Terpenoid synthases |Squalene synthase |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1uhna_ : (LYS160) (MET202) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calcineurin B-like protein 2 |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d2i8fa_ : (GLY3) (LYS49) [view usage] : a.3.1.1 |Cytochrome c |Cytochrome c |monodomain cytochrome c |automated matches |Pseudomonas stutzeri [TaxId: 96564]
d3fcya_ : (LYS212) (ILE260) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Thermoanaerobacterium sp. [TaxId: 60708]
d3ekbb_ : (SER72) (HIS116) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
d1ucga_ : (GLN62) (ALA122) [view usage] : d.124.1.1 |Ribonuclease Rh-like |Ribonuclease Rh-like |Ribonuclease Rh-like |Ribonuclease MC1 |Bitter gourd (Momordica charantia) [TaxId: 3673]
d1vrga2 : (PRO433) (GLY476) [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |Propionyl-CoA carboxylase complex B subunit, PccB |Thermotoga maritima [TaxId: 2336]
d1pa2a_ : (ALA14) (SER73) [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Plant peroxidase |Thale cress (Arabidopsis thaliana), peroxidase A2 [TaxId: 3702]
d3d3za_ : (ASN74) (ILE119) [view usage] : d.124.1.0 |Ribonuclease Rh-like |Ribonuclease Rh-like |automated matches |automated matches |Aspergillus niger [TaxId: 5061]
d1q1va_ : (THR321) (HIS378) [view usage] : a.159.4.1 |Another 3-helical bundle |DEK C-terminal domain |DEK C-terminal domain |DEK C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d4p47a_ : (VAL308) (GLN345) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Ochrobactrum anthropi [TaxId: 439375]
d3dyia_ : (HIS126) (PRO179) [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Lactobacillus rhamnosus [TaxId: 486408]
d4jota_ : (ASP70) (LEU105) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Deinococcus radiodurans [TaxId: 243230]
d1z8hb_ : (GLU166) (ASN203) [view usage] : c.23.10.6 |Flavodoxin-like |SGNH hydrolase |Hypothetical protein alr1529 |Hypothetical protein alr1529 |Nostoc sp. PCC 7120 [TaxId: 103690]
d2nuua_ : (SER257) (ARG307) [view usage] : f.44.1.0 |Ammonium transporter |Ammonium transporter |automated matches |automated matches |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.69, c.94, a.104, a.128, c.66, c.14, a.93, c.23, d.2, a.25, d.124, a.4, a.39, a.3, a.116, a.26, d.120, a.204, f.44,
a.159, c.141