Protein Concepts Dictionary

Tableau information

Concept source:  d2ounb_  amino acid (a.a.) range (ASP715)(GLY768)

nSSEs in this Concept: 4

String of secondary struct.elems. (SSEs) defining this concept: HHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP715)  (GLU721) H1
	  (GLU721)  (ALA732) H2
	  (ALA734)  (ILE744) H3
	  (PRO746)  (GLY768) H4

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                          
H2       72.4°   H2                   
H3      -66.1°  -31.9°   H3            
H4      -94.4° -150.1° -159.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1mi1a1 :  (ALA2258) (GLY2298)   [view usage] : a.169.1.1 |BEACH domain |BEACH domain |BEACH domain |BEACH domain of neurobeachin |Human (Homo sapiens) [TaxId: 9606]
 d4qgeb_ :   (ASP443)  (LEU503)   [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |High-affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A, PDE9A |Chimpanzee (Pan troglodytes) [TaxId: 9598]
 d3jwqc_ :   (ARG807)  (ALA857)   [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4d09c_ :   (ASP849)  (ILE904)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3m9ia_ :   (SER159)  (PHE221)   [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Sheep (Ovis aries) [TaxId: 9940]
 d4c1ia_ :   (ASP849)  (SER899)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3qbpb_ :   (HIS133)  (GLU228)   [view usage] : a.127.1.0 |L-aspartase-like |L-aspartase-like |automated matches |automated matches |Mycobacterium marinum [TaxId: 216594]
 d3frga_ :   (ASP433)  (ILE484)   [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b |Human (Homo sapiens) [TaxId: 9606]
 d4ajgd_ :   (ASP715)  (GLY768)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2r0oa2 :   (ALA165)  (LEU215)   [view usage] : a.40.1.0 |CH domain-like |Calponin-homology domain, CH-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3sl3b_ :   (ASP359)  (ILE410)   [view usage] : a.211.1.2 |HD-domain/PDEase-like |HD-domain/PDEase-like |PDEase |Catalytic domain of cyclic nucleotide phosphodiesterase pde4d |Human (Homo sapiens) [TaxId: 9606]
 d4nefd_ :   (PRO160)  (VAL222)   [view usage] : f.19.1.0 |Aquaporin-like |Aquaporin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1h6ia_ :   (ALA171)  (PHE217)   [view usage] : f.19.1.1 |Aquaporin-like |Aquaporin-like |Aquaporin-like |Aquaporin-1 |Human (Homo sapiens) [TaxId: 9606]
 d3g3na_ :   (ASP403)  (LEU454)   [view usage] : a.211.1.0 |HD-domain/PDEase-like |HD-domain/PDEase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.127,   a.211,    f.19,    a.40,   a.169