Tableau information
Concept source: d1mjgm_ amino acid (a.a.) range (LYS672)(GLY719)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS672) (LEU678) H1
(GLU681) (GLY690) H2
(PHE695) (ILE699) H3
(THR707) (GLY719) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 80.1° H2
H3 154.0° 116.8° H3
H4 -43.8° -55.0° 162.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3qkqa_ : (ASP240) (HIS296) [view usage] : c.45.1.2 |(Phosphotyrosine protein) phosphatases II |(Phosphotyrosine protein) phosphatases II |Higher-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Human (Homo sapiens), 1B [TaxId: 9606]
d1nyoa_ : (GLY5) (LEU47) [view usage] : b.118.1.1 |FAS1 domain |FAS1 domain |FAS1 domain |Immunogenic protein MPT70 |Mycobacterium tuberculosis [TaxId: 1773]
d2vv5a3 : (TYR27) (LEU111) [view usage] : f.34.1.1 |Mechanosensitive channel protein MscS (YggB), transmembrane region |Mechanosensitive channel protein MscS (YggB), transmembrane region |Mechanosensitive channel protein MscS (YggB), transmembrane region |Mechanosensitive channel protein MscS (YggB), transmembrane region |Escherichia coli [TaxId: 562]
d1w36b2 : (MET658) (LEU716) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Exodeoxyribonuclease V beta chain (RecB), N-terminal domain |Escherichia coli [TaxId: 562]
d3wccc_ : (PRO226) (SER283) [view usage] : a.128.1.0 |Terpenoid synthases |Terpenoid synthases |automated matches |automated matches |Trypanosoma cruzi [TaxId: 353153]
d1y9bb_ : (VAL14) (GLU83) [view usage] : a.43.1.9 |Ribbon-helix-helix |Ribbon-helix-helix |VCA0319-like |Hypothetical protein VCA0482 (VCA0319) |Vibrio cholerae [TaxId: 666]
d1ru3a_ : (LYS675) (GLY722) [view usage] : e.26.1.3 |Prismane protein-like |Prismane protein-like |Acetyl-CoA synthase |Monomeric acetyl-CoA synthase |Carboxydothermus hydrogenoformans [TaxId: 129958]
d2gena2 : (LEU115) (ARG191) [view usage] : a.121.1.1 |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |Probable transcriptional regulator PA1836 |Pseudomonas aeruginosa [TaxId: 287]
d2ngrb_ : (LEU357) (SER405) [view usage] : a.116.1.1 |GTPase activation domain, GAP |GTPase activation domain, GAP |BCR-homology GTPase activation domain (BH-domain) |Cdc42GAP |Human (Homo sapiens) [TaxId: 9606]
d1j8fc_ : (THR101) (LYS144) [view usage] : c.31.1.5 |DHS-like NAD/FAD-binding domain |DHS-like NAD/FAD-binding domain |Sir2 family of transcriptional regulators |Sirt2 histone deacetylase |Human (Homo sapiens) [TaxId: 9606]
d2oa6d_ : (ASN48) (GLY114) [view usage] : a.128.1.4 |Terpenoid synthases |Terpenoid synthases |Aristolochene/pentalenene synthase |automated matches |Aspergillus terreus [TaxId: 33178]
d1s0pa_ : (VAL52) (LYS114) [view usage] : a.192.1.1 |N-terminal domain of adenylylcyclase associated protein, CAP |N-terminal domain of adenylylcyclase associated protein, CAP |N-terminal domain of adenylylcyclase associated protein, CAP |N-terminal domain of adenylylcyclase associated protein, CAP |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
d1sora_ : (GLY175) (GLY239) [view usage] : f.19.1.1 |Aquaporin-like |Aquaporin-like |Aquaporin-like |Aquaporin-0 |Sheep (Ovis aries) [TaxId: 9940]
d1ng9a1 : (ASP270) (GLY329) [view usage] : a.113.1.1 |DNA repair protein MutS, domain III |DNA repair protein MutS, domain III |DNA repair protein MutS, domain III |DNA repair protein MutS, domain III |Escherichia coli [TaxId: 562]
d1gzsb_ : (LYS81) (GLY152) [view usage] : a.168.1.1 |SopE-like GEF domain |SopE-like GEF domain |SopE-like GEF domain |GEF domain of SopE toxin |Salmonella typhimurium [TaxId: 90371]
d1u77a_ : (TRP135) (SER219) [view usage] : f.44.1.1 |Ammonium transporter |Ammonium transporter |Ammonium transporter |Ammonium transporter AmtB |Escherichia coli [TaxId: 562]
d1oaoc_ : (LYS672) (GLY719) [view usage] : e.26.1.3 |Prismane protein-like |Prismane protein-like |Acetyl-CoA synthase |Bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase (CODH/ACS) alpha (ACS) subunit |Moorella thermoacetica [TaxId: 1525]
d3odoa1 : (GLY397) (PHE461) [view usage] : a.87.1.0 |DBL homology domain (DH-domain) |DBL homology domain (DH-domain) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1smaa3 : (TYR377) (ALA416) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Maltogenic amylase, central domain |Thermus sp. [TaxId: 275]
d2gfva1 : (CYS58) (ILE100) [view usage] : c.95.1.1 |Thiolase-like |Thiolase-like |Thiolase-related |Beta-ketoacyl-ACP synthase II |Escherichia coli [TaxId: 562]
d1oaod_ : (LYS672) (GLU717) [view usage] : e.26.1.3 |Prismane protein-like |Prismane protein-like |Acetyl-CoA synthase |Bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase (CODH/ACS) alpha (ACS) subunit |Moorella thermoacetica [TaxId: 1525]
d2zy9a3 : (VAL298) (GLY382) [view usage] : f.57.1.1 |MgtE membrane domain-like |MgtE membrane domain-like |MgtE membrane domain-like |Mg2+ transporter MgtE |Thermus thermophilus [TaxId: 274]
d2z8yo_ : (LYS672) (GLU717) [view usage] : e.26.1.3 |Prismane protein-like |Prismane protein-like |Acetyl-CoA synthase |automated matches |Moorella thermoacetica [TaxId: 1525]
d1mjgm_ : (LYS672) (GLY719) [view usage] : e.26.1.3 |Prismane protein-like |Prismane protein-like |Acetyl-CoA synthase |Bifunctional carbon monoxide dehydrogenase/acetyl-CoA synthase (CODH/ACS) alpha (ACS) subunit |Moorella thermoacetica [TaxId: 1525]
d2joka_ : (LEU177) (LYS252) [view usage] : a.168.1.1 |SopE-like GEF domain |SopE-like GEF domain |SopE-like GEF domain |Effector protein BopE |Burkholderia pseudomallei [TaxId: 28450]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, a.128, c.45, c.37, c.95, c.31, e.26, f.19, a.87, a.116, f.57, a.113, f.44, a.121, a.192, b.118, a.43, f.34, a.168