Tableau information
Concept source: d1hiwc_ amino acid (a.a.) range (SER9)(LEU64)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER9) (ILE19) H1
(LYS30) (ALA45) H2
(ASN47) (THR53) H3
(THR53) (LEU64) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 101.8° H2
H3 86.2° 138.6° H3
H4 -41.9° 59.9° -117.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1hiwa_ : (SER9) (LEU64) [view usage] : a.61.1.1 |Retroviral matrix proteins |Retroviral matrix proteins |Immunodeficiency virus matrix proteins |HIV-1 matrix protein (HIV-1 MA, HIVp17, p17, MA) |Human immunodeficiency virus type 1 [TaxId: 11676]
d1hiwc_ : (SER9) (LEU64) [view usage] : a.61.1.1 |Retroviral matrix proteins |Retroviral matrix proteins |Immunodeficiency virus matrix proteins |HIV-1 matrix protein (HIV-1 MA, HIVp17, p17, MA) |Human immunodeficiency virus type 1 [TaxId: 11676]
d2erba_ : (ASP7) (LYS63) [view usage] : a.39.2.0 |EF Hand-like |Insect pheromone/odorant-binding proteins |automated matches |automated matches |Anopheles gambiae [TaxId: 180454]
d2yfvb_ : (THR30) (THR96) [view usage] : a.22.1.1 |Histone-fold |Histone-fold |Nucleosome core histones |Histone H4 |Kluyveromyces lactis [TaxId: 284590]
d1e9sb_ : (ASN193) (GLU259) [view usage] : c.37.1.11 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |RecA protein-like (ATPase-domain) |Bacterial conjugative coupling protein TrwB |Escherichia coli [TaxId: 562]
d3sm4a_ : (PRO3) (CYS66) [view usage] : c.52.1.13 |Restriction endonuclease-like |Restriction endonuclease-like |lambda exonuclease |lambda exonuclease |Bacteriophage lambda [TaxId: 10710]
d1avqc_ : (PRO3) (CYS66) [view usage] : c.52.1.13 |Restriction endonuclease-like |Restriction endonuclease-like |lambda exonuclease |lambda exonuclease |Bacteriophage lambda [TaxId: 10710]
d4jycc_ : (GLY247) (ILE327) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Metallochaperone MeaB |Methylobacterium extorquens [TaxId: 408]
d1qb2b_ : (LEU329) (PRO400) [view usage] : a.36.1.1 |Signal peptide-binding domain |Signal peptide-binding domain |Signal peptide-binding domain |SRP54M |Human (Homo sapiens) [TaxId: 9606]
d2h9fa2 : (GLU237) (LYS277) [view usage] : d.21.1.4 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |PA0793-like |Hypothetical protein PA0793 |Pseudomonas aeruginosa [TaxId: 287]
d2dtua1 : (HIS317) (GLU375) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of family B DNA polymerases |Bacteriophage RB69 [TaxId: 12353]
d3ogna_ : (ASP7) (LYS63) [view usage] : a.39.2.0 |EF Hand-like |Insect pheromone/odorant-binding proteins |automated matches |automated matches |Culex quinquefasciatus [TaxId: 7176]
d2gpba_ : (VAL389) (ALA447) [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Glycogen phosphorylase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d1noya_ : (HIS314) (ASN368) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of family B DNA polymerases |Bacteriophage T4 [TaxId: 10665]
d1ddta3 : (SER261) (LEU307) [view usage] : f.1.2.1 |Toxins' membrane translocation domains |Diphtheria toxin, middle domain |Diphtheria toxin, middle domain |Diphtheria toxin, middle domain |Corynebacterium diphtheriae [TaxId: 1717]
d1pvaa_ : (ALA1) (LEU32) [view usage] : a.39.1.4 |EF Hand-like |EF-hand |Parvalbumin |Parvalbumin |Pike (Esox lucius) [TaxId: 8010]
d1hiwq_ : (SER9) (LEU64) [view usage] : a.61.1.1 |Retroviral matrix proteins |Retroviral matrix proteins |Immunodeficiency virus matrix proteins |HIV-1 matrix protein (HIV-1 MA, HIVp17, p17, MA) |Human immunodeficiency virus type 1 [TaxId: 11676]
d1hiws_ : (SER9) (LEU64) [view usage] : a.61.1.1 |Retroviral matrix proteins |Retroviral matrix proteins |Immunodeficiency virus matrix proteins |HIV-1 matrix protein (HIV-1 MA, HIVp17, p17, MA) |Human immunodeficiency virus type 1 [TaxId: 11676]
d4jmua_ : (SER9) (LEU64) [view usage] : a.61.1.1 |Retroviral matrix proteins |Retroviral matrix proteins |Immunodeficiency virus matrix proteins |automated matches |Human immunodeficiency virus type 1 (new york-5 isolate) [TaxId: 11698]
d4khua1 : (HIS317) (GLU375) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of family B DNA polymerases |Bacteriophage RB69 [TaxId: 12353]
d1hiwr_ : (GLY10) (LEU64) [view usage] : a.61.1.1 |Retroviral matrix proteins |Retroviral matrix proteins |Immunodeficiency virus matrix proteins |HIV-1 matrix protein (HIV-1 MA, HIVp17, p17, MA) |Human immunodeficiency virus type 1 [TaxId: 11676]
d3slpa_ : (PRO3) (CYS66) [view usage] : c.52.1.13 |Restriction endonuclease-like |Restriction endonuclease-like |lambda exonuclease |lambda exonuclease |Bacteriophage lambda [TaxId: 10710]
d1ig9a1 : (HIS317) (LYS374) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of family B DNA polymerases |Bacteriophage RB69 [TaxId: 12353]
d2ecpa_ : (ASP388) (VAL447) [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Maltodextrin phosphorylase (MALP) |Escherichia coli [TaxId: 562]
d3k6cg_ : (PRO9) (TYR85) [view usage] : a.25.1.5 |Ferritin-like |Ferritin-like |half-ferritin |Hypothetical protein NE0167 |Nitrosomonas europaea [TaxId: 915]
d2dy4a1 : (HIS317) (GLU375) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of family B DNA polymerases |Bacteriophage RB69 [TaxId: 12353]
d3n7ha_ : (ASP7) (LYS63) [view usage] : a.39.2.0 |EF Hand-like |Insect pheromone/odorant-binding proteins |automated matches |automated matches |Anopheles gambiae [TaxId: 180454]
d2l2ca_ : (ASP7) (LYS63) [view usage] : a.39.2.0 |EF Hand-like |Insect pheromone/odorant-binding proteins |automated matches |automated matches |Culex quinquefasciatus [TaxId: 7176]
d3k6ca_ : (PRO9) (TYR85) [view usage] : a.25.1.5 |Ferritin-like |Ferritin-like |half-ferritin |Hypothetical protein NE0167 |Nitrosomonas europaea [TaxId: 915]
d2i94a_ : (PRO135) (GLN187) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |automated matches |Cow (Bos taurus) [TaxId: 9913]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.37, c.55, c.87, a.25, d.21, c.52, a.39, f.1, a.61, a.22, a.36