Protein Concepts Dictionary

Tableau information

Concept source:  d3n1ya_  amino acid (a.a.) range (SER351)(PRO390)

nSSEs in this Concept: 4

String of secondary struct.elems. (SSEs) defining this concept: HHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER351)  (LYS361) H1
	  (TRP365)  (GLN371) H2
	  (GLN371)  (GLY383) H3
	  (PRO385)  (PRO390) H4

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                          
H2      129.6°   H2                   
H3     -177.1°   48.3°   H3            
H4       39.1°   95.9° -140.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.5°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3rnba_ :   (SER351)  (PRO390)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouA |Pseudomonas sp. [TaxId: 320855]
 d4kuxa_ :    (SER91)  (GLY174)   [view usage] : a.128.1.4 |Terpenoid synthases |Terpenoid synthases |Aristolochene/pentalenene synthase |automated matches |Aspergillus terreus [TaxId: 33178]
 d3n20a_ :   (PRO352)  (PRO390)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouA |Pseudomonas sp. [TaxId: 320855]
 d2nt8a_ :    (ASP25)   (SER83)   [view usage] : a.25.2.0 |Ferritin-like |Cobalamin adenosyltransferase-like |automated matches |automated matches |Lactobacillus reuteri [TaxId: 1598]
 d3rnga_ :   (PRO352)  (PRO390)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouA |Pseudomonas sp. [TaxId: 320855]
 d3rnea_ :   (PRO352)  (PRO390)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouA |Pseudomonas sp. [TaxId: 320855]
 d3rnca_ :   (PRO352)  (PRO390)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouA |Pseudomonas sp. [TaxId: 320855]
 d2rdba_ :   (SER351)  (PRO390)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouA |Pseudomonas stutzeri [TaxId: 316]
 d3n1ya_ :   (SER351)  (PRO390)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouA |Pseudomonas sp. [TaxId: 320855]
 d3n1xa_ :   (PRO352)  (PRO390)   [view usage] : a.25.1.2 |Ferritin-like |Ferritin-like |Ribonucleotide reductase-like |Toluene, o-xylene monooxygenase oxygenase subunit TouA |Pseudomonas sp. [TaxId: 320855]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.128,    a.25