Protein Concepts Dictionary

Tableau information

Concept source:  d4a1wd_  amino acid (a.a.) range (THR115)(LEU194)

nSSEs in this Concept: 4

String of secondary struct.elems. (SSEs) defining this concept: HHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (THR115)  (PHE131) H1
	  (TRP137)  (GLU158) H2
	  (MET159)  (ASN185) H3
	  (TRP188)  (LEU194) H4

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                          
H2      163.8°   H2                   
H3      -20.9° -175.2°   H3            
H4       78.3°  -85.9°   98.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3g0va_ :   (GLY151)  (ILE205)   [view usage] : a.28.3.1 |Acyl carrier protein-like |Retrovirus capsid dimerization domain-like |Retrovirus capsid protein C-terminal domain |automated matches |Rous sarcoma virus [TaxId: 11888]
 d1ty4b_ :   (SER147)  (TYR235)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |Apoptosis regulator ced-9 |Nematode (Caenorhabditis elegans) [TaxId: 6239]
 d3q9za_ :   (SER294)  (GLN331)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Protein kinase CK2, alpha subunit |Human (Homo sapiens) [TaxId: 9606]
 d3r85a_ :   (THR118)  (LEU194)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2wk4b_ :   (ASP409)  (VAL497)   [view usage] : e.8.1.0 |DNA/RNA polymerases |DNA/RNA polymerases |automated matches |automated matches |Sapporo virus [TaxId: 95342]
 d2yj1a_ :   (TYR120)  (ASN198)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4a1wb_ :   (THR115)  (LEU194)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3lxja_ :  (LEU1005) (ARG1085)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3r85c_ :   (THR115)  (LEU194)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3inqa_ :   (TYR120)  (LEU194)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2oqya1 :    (ASP52)  (GLY121)   [view usage] : d.54.1.0 |Enolase N-terminal domain-like |Enolase N-terminal domain-like |automated matches |automated matches |Oceanobacillus iheyensis [TaxId: 182710]
 d1lxla_ :   (GLN121)  (LEU194)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |Apoptosis regulator Bcl-xL |Human (Homo sapiens) [TaxId: 9606]
 d3sfub_ :   (ASP410)  (GLY491)   [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |automated matches |Murine norovirus 1 [TaxId: 223997]
 d4tuhc_ :   (TYR120)  (LEU194)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |Apoptosis regulator Bcl-xL |Human (Homo sapiens) [TaxId: 9606]
 d1zoha_ :   (SER294)  (GLU331)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Protein kinase CK2, alpha subunit |Maize (Zea mays) [TaxId: 4577]
 d2uuta_ :   (ASP403)  (PHE486)   [view usage] : e.8.1.0 |DNA/RNA polymerases |DNA/RNA polymerases |automated matches |automated matches |Sapporo virus [TaxId: 95342]
 d3hmha_ :  (LEU1569) (GLU1651)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4tuhh_ :   (TYR120)  (LEU194)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |Apoptosis regulator Bcl-xL |Human (Homo sapiens) [TaxId: 9606]
 d4a1wd_ :   (THR115)  (LEU194)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3qida_ :   (ARG411)  (VAL488)   [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |automated matches |Murine norovirus 1 [TaxId: 223997]
 d3lxjd_ :  (LEU1005) (LYS1084)   [view usage] : a.29.2.0 |Bromodomain-like |Bromodomain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4a1wa_ :   (THR115)  (LEU194)   [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   e.8,   d.144,    a.29,     f.1,    d.54,    a.28