Tableau information
Concept source: d2ebfx3 amino acid (a.a.) range (SER1134)(VAL1168)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER1134) (ARG1138) H1
(ARG1138) (ASN1150) H2
(ASP1151) (VAL1158) H3
(ALA1162) (VAL1168) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -39.7° H2
H3 -89.5° -58.6° H3
H4 106.8° 115.5° 142.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1ppja1 : (GLU123) (SER166) [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Cytochrome bc1 core subunit 1 |Cow (Bos taurus) [TaxId: 9913]
d4oztu_ : (ARG347) (SER390) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |Pediculus humanus [TaxId: 121224]
d1rp4a_ : (GLU301) (CYS349) [view usage] : a.227.1.1 |ERO1-like |ERO1-like |ERO1-like |Endoplasmic oxidoreductin 1, Ero1p |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4jnza2 : (THR545) (ALA582) [view usage] : c.1.23.2 |TIM beta/alpha-barrel |FAD-linked oxidoreductase |Proline dehydrohenase domain of bifunctional PutA protein |Proline dehydrohenase domain of bifunctional PutA protein |Escherichia coli K-12 [TaxId: 83333]
d3nf4b2 : (GLY343) (THR382) [view usage] : a.29.3.0 |Bromodomain-like |Acyl-CoA dehydrogenase C-terminal domain-like |automated matches |automated matches |Mycobacterium thermoresistibile [TaxId: 1797]
d1tiwa2 : (THR545) (ALA582) [view usage] : c.1.23.2 |TIM beta/alpha-barrel |FAD-linked oxidoreductase |Proline dehydrohenase domain of bifunctional PutA protein |Proline dehydrohenase domain of bifunctional PutA protein |Escherichia coli [TaxId: 562]
d4c52a_ : (ASN5) (HIS113) [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4fopa_ : (SER141) (TYR190) [view usage] : c.56.3.0 |Phosphorylase/hydrolase-like |Peptidyl-tRNA hydrolase-like |automated matches |automated matches |Acinetobacter baumannii [TaxId: 575584]
d2c7xa_ : (VAL107) (ILE154) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Streptomyces venezuelae [TaxId: 54571]
d4jnya2 : (THR545) (ALA582) [view usage] : c.1.23.2 |TIM beta/alpha-barrel |FAD-linked oxidoreductase |Proline dehydrohenase domain of bifunctional PutA protein |Proline dehydrohenase domain of bifunctional PutA protein |Escherichia coli K-12 [TaxId: 83333]
d4gphc_ : (LEU608) (ALA649) [view usage] : a.132.1.1 |Heme oxygenase-like |Heme oxygenase-like |Eukaryotic type heme oxygenase |Heme oxygenase HmuO |Corynebacterium diphtheriae [TaxId: 1717]
d2r6ib_ : (ASN87) (TYR126) [view usage] : d.381.1.1 |ATP12-like |ATP12-like |ATP12-like |Uncharacterized protein Atu1473 |Agrobacterium tumefaciens [TaxId: 358]
d4ctha_ : (VAL130) (TYR177) [view usage] : d.92.1.4 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neutral endopeptidase (neprilysin) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3c07b2 : (PHE117) (ILE164) [view usage] : a.121.1.1 |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |Tetracyclin repressor-like, C-terminal domain |Putative transcriptional regulator SCO4850 |Streptomyces coelicolor [TaxId: 1902]
d4a1wb_ : (GLN3) (HIS113) [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2r6gf2 : (LYS262) (VAL327) [view usage] : f.58.1.1 |MetI-like |MetI-like |MetI-like |Maltose transport system permease protein MalF |Escherichia coli [TaxId: 562]
d3ffkb2 : (ASN252) (ASN296) [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |automated matches |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d3e2qa2 : (THR545) (VAL581) [view usage] : c.1.23.2 |TIM beta/alpha-barrel |FAD-linked oxidoreductase |Proline dehydrohenase domain of bifunctional PutA protein |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2cd8a_ : (PRO97) (ILE154) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Streptomyces venezuelae [TaxId: 54571]
d1ldfa_ : (ASN68) (GLY133) [view usage] : f.19.1.1 |Aquaporin-like |Aquaporin-like |Aquaporin-like |Glycerol uptake facilitator protein GlpF |Escherichia coli [TaxId: 562]
d1aa0a_ : (VAL371) (ALA456) [view usage] : h.1.17.1 |Parallel coiled-coil |Fibritin |Fibritin |Fibritin |Bacteriophage T4 [TaxId: 10665]
d2giha_ : (GLY30) (PHE80) [view usage] : c.52.1.19 |Restriction endonuclease-like |Restriction endonuclease-like |Restriction endonuclease HincII |Restriction endonuclease HincII |Haemophilus influenzae [TaxId: 727]
d1ezvb1 : (LYS115) (ASN157) [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Cytochrome bc1 core subunit 2 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2w8ya_ : (GLU786) (ASN828) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1mdue2 : (SER340) (HIS373) [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin |Chicken (Gallus gallus) [TaxId: 9031]
d4cina_ : (GLN3) (PHE131) [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2iazb_ : (GLY0) (GLY58) [view usage] : a.281.1.2 |YheA-like |YheA/YmcA-like |YheA-like |Hypothetical protein SP1372 |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d1ni5a1 : (ASN180) (LEU226) [view usage] : c.26.2.5 |Adenine nucleotide alpha hydrolase-like |Adenine nucleotide alpha hydrolases-like |PP-loop ATPase |tRNA-Ile-lysidine synthetase, TilS, N-terminal domain |Escherichia coli [TaxId: 562]
d3b9gb_ : (PRO80) (LYS114) [view usage] : c.70.1.1 |Nucleoside hydrolase |Nucleoside hydrolase |Nucleoside hydrolase |automated matches |Trypanosoma vivax [TaxId: 5699]
d4ny0a2 : (PRO208) (TYR251) [view usage] : a.11.2.0 |Acyl-CoA binding protein-like |Second domain of FERM |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3g68a_ : (GLN4) (THR31) [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
d3exfc_ : (PRO268) (ALA326) [view usage] : c.36.1.11 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase PP module |E1-beta subunit of pyruvate dehydrogenase (PP module) |Human (Homo sapiens) [TaxId: 9606]
d2ozla1 : (PRO268) (ALA324) [view usage] : c.36.1.11 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase PP module |E1-beta subunit of pyruvate dehydrogenase (PP module) |Human (Homo sapiens) [TaxId: 9606]
d4hw2c_ : (GLY171) (LEU246) [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1dmta_ : (VAL130) (TYR177) [view usage] : d.92.1.4 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neutral endopeptidase (neprilysin) |Neutral endopeptidase (neprilysin) |Human (Homo sapiens) [TaxId: 9606]
d1vmaa1 : (PHE4) (ASP47) [view usage] : a.24.13.1 |Four-helical up-and-down bundle |Domain of the SRP/SRP receptor G-proteins |Domain of the SRP/SRP receptor G-proteins |Signal recognition particle receptor, FtsY |Thermotoga maritima [TaxId: 2336]
d3mvqf2 : (SER444) (ASN494) [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Glutamate dehydrogenase |Cow (Bos taurus) [TaxId: 9913]
d2f4ma1 : (THR167) (LYS235) [view usage] : d.3.1.4 |Cysteine proteinases |Cysteine proteinases |Transglutaminase core |Peptide:N-glycanase 1, PNG1 |Mouse (Mus musculus) [TaxId: 10090]
d1ntzj_ : (ALA2) (LYS56) [view usage] : f.23.14.1 |Single transmembrane helix |Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Cow (Bos taurus) [TaxId: 9913]
d4dnja_ : (PRO105) (VAL162) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 258594]
d1n1ea1 : (GLY252) (THR294) [view usage] : a.100.1.6 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |Glycerol-3-phosphate dehydrogenase |Glycerol-3-phosphate dehydrogenase |Trypanosome (Leishmania mexicana) [TaxId: 5665]
d1yhha_ : (TRP57) (MET88) [view usage] : d.22.1.1 |GFP-like |GFP-like |Fluorescent proteins |automated matches |Jellyfish (Aequorea victoria) [TaxId: 6100]
d1c4xa_ : (MET179) (LEU213) [view usage] : c.69.1.10 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |Carbon-carbon bond hydrolase |2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase (BPHD) |Rhodococcus sp., strain rha1 [TaxId: 1831]
d2ozlc_ : (PRO268) (ASP327) [view usage] : c.36.1.11 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Branched-chain alpha-keto acid dehydrogenase PP module |E1-beta subunit of pyruvate dehydrogenase (PP module) |Human (Homo sapiens) [TaxId: 9606]
d4a1wd_ : (MET1) (HIS113) [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1fx8a_ : (ASN68) (GLY133) [view usage] : f.19.1.1 |Aquaporin-like |Aquaporin-like |Aquaporin-like |Glycerol uptake facilitator protein GlpF |Escherichia coli [TaxId: 562]
d1g5ma_ : (ASP10) (PHE138) [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |Bcl-2 |Human (Homo sapiens) [TaxId: 9606]
d1z82b2 : (ASP220) (GLU262) [view usage] : a.100.1.0 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d1t77a1 : (THR2399) (LEU2441) [view usage] : a.169.1.1 |BEACH domain |BEACH domain |BEACH domain |Lipopolysaccharide-responsive and beige-like anchor protein LRBA |Human (Homo sapiens) [TaxId: 9606]
d4a1wa_ : (MET1) (LEU112) [view usage] : f.1.4.1 |Toxins' membrane translocation domains |Bcl-2 inhibitors of programmed cell death |Bcl-2 inhibitors of programmed cell death |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2z15c_ : (TYR54) (LEU95) [view usage] : d.370.1.1 |BTG domain-like |BTG domain-like |BTG domain-like |TOB1, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.69, a.104, c.2, c.26, c.56, c.80, d.92, c.36, d.185, c.55, d.3, a.132, a.123, c.52, a.100, a.29, f.1, f.19, a.24,
a.11, c.70, f.58, f.23, a.281, a.121, d.22, h.1, a.227, d.381, a.169, d.370