Tableau information
Concept source: d3n0gb2 amino acid (a.a.) range (TYR327)(GLY402)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(TYR327) (ASP349) H1
(THR353) (ARG366) H2
(VAL369) (ASP374) H3
(ASP377) (GLY402) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -149.4° H2
H3 22.1° 171.0° H3
H4 -158.5° -20.8° 166.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2jw2a_ : (SER16) (CYS77) [view usage] : a.60.1.3 |SAM domain-like |SAM/Pointed domain |Variant SAM domain |Deleted in Liver Cancer 2, DLC2 |Human (Homo sapiens) [TaxId: 9606]
d1zoyd_ : (ALA38) (LEU136) [view usage] : f.21.2.2 |Heme-binding four-helical bundle |Fumarate reductase respiratory complex transmembrane subunits |Succinate dehydrogenase/Fumarate reductase transmembrane subunits (SdhC/FrdC and SdhD/FrdD) |Small cytochrome binding protein CybS |Pig (Sus scrofa) [TaxId: 9823]
d1hlma_ : (PRO14) (MET88) [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, different isoforms |Caudina arenicola, also known as Molpadia arenicola [TaxId: 7698]
d2dkya1 : (THR15) (MET82) [view usage] : a.60.1.3 |SAM domain-like |SAM/Pointed domain |Variant SAM domain |Deleted in liver cancer 1 protein, DLC-1 |Human (Homo sapiens) [TaxId: 9606]
d2gyta1 : (LYS5) (MET75) [view usage] : a.60.1.3 |SAM domain-like |SAM/Pointed domain |Variant SAM domain |Deleted in liver cancer 1 protein, DLC-1 |Human (Homo sapiens) [TaxId: 9606]
d2ot3a_ : (SER139) (LEU219) [view usage] : a.222.1.1 |VPS9 domain |VPS9 domain |VPS9 domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2h80a1 : (SER16) (SER79) [view usage] : a.60.1.3 |SAM domain-like |SAM/Pointed domain |Variant SAM domain |Deleted in Liver Cancer 2, DLC2 |Human (Homo sapiens) [TaxId: 9606]
d1sknp_ : (SER459) (HIS526) [view usage] : a.37.1.1 |A DNA-binding domain in eukaryotic transcription factors |A DNA-binding domain in eukaryotic transcription factors |A DNA-binding domain in eukaryotic transcription factors |Skn-1 |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d3m02a2 : (SER284) (SER354) [view usage] : a.128.1.3 |Terpenoid synthases |Terpenoid synthases |Terpenoid cyclase C-terminal domain |automated matches |Tobacco (Nicotiana tabacum) [TaxId: 4097]
d1hx9a2 : (TYR283) (SER354) [view usage] : a.128.1.3 |Terpenoid synthases |Terpenoid synthases |Terpenoid cyclase C-terminal domain |5-Epi-aristolochene synthase |Tobacco (Nicotiana tabacum) [TaxId: 4097]
d1c5aa_ : (MET1) (ALA63) [view usage] : a.50.1.1 |Anaphylotoxins (complement system) |Anaphylotoxins (complement system) |Anaphylotoxins (complement system) |C5a anaphylotoxin |Pig (Sus scrofa) [TaxId: 9823]
d1txua_ : (THR135) (TYR220) [view usage] : a.222.1.1 |VPS9 domain |VPS9 domain |VPS9 domain |Rab5 GDP/GTP exchange factor (Rabex-5) |Human (Homo sapiens), gamma isoform [TaxId: 9606]
d2rccb_ : (ASP149) (TYR266) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Bacillus halodurans [TaxId: 272558]
d2fbwd_ : (ALA6) (SER102) [view usage] : f.21.2.2 |Heme-binding four-helical bundle |Fumarate reductase respiratory complex transmembrane subunits |Succinate dehydrogenase/Fumarate reductase transmembrane subunits (SdhC/FrdC and SdhD/FrdD) |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d1qzwa1 : (MET1) (LEU81) [view usage] : a.24.13.1 |Four-helical up-and-down bundle |Domain of the SRP/SRP receptor G-proteins |Domain of the SRP/SRP receptor G-proteins |Signal sequence recognition protein Ffh |Sulfolobus solfataricus [TaxId: 2287]
d5eata2 : (ILE297) (SER354) [view usage] : a.128.1.3 |Terpenoid synthases |Terpenoid synthases |Terpenoid cyclase C-terminal domain |5-Epi-aristolochene synthase |Tobacco (Nicotiana tabacum) [TaxId: 4097]
d1yq3d_ : (ALA5) (ILE103) [view usage] : f.21.2.2 |Heme-binding four-helical bundle |Fumarate reductase respiratory complex transmembrane subunits |Succinate dehydrogenase/Fumarate reductase transmembrane subunits (SdhC/FrdC and SdhD/FrdD) |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d1hxga2 : (SER284) (LEU353) [view usage] : a.128.1.3 |Terpenoid synthases |Terpenoid synthases |Terpenoid cyclase C-terminal domain |5-Epi-aristolochene synthase |Tobacco (Nicotiana tabacum) [TaxId: 4097]
d3n0gb2 : (TYR327) (GLY402) [view usage] : a.128.1.0 |Terpenoid synthases |Terpenoid synthases |automated matches |automated matches |Populus tremula [TaxId: 80863]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.128, a.25, f.21, a.1, a.24, a.60, a.222, a.50, a.37