Tableau information
Concept source: d1sxea_ amino acid (a.a.) range (ASP130)(MET171)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP130) (SER135) H1
(SER135) (GLY151) H2
(LEU158) (ASP164) H3
(ASP164) (MET171) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 116.4° H2
H3 -97.3° 141.0° H3
H4 145.7° -51.9° 108.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1izma_ : (SER4) (ASP76) [view usage] : a.199.1.1 |YgfB-like |YgfB-like |YgfB-like |Hypothetical protein HI0817 |Haemophilus influenzae [TaxId: 727]
d3hrdd2 : (SER87) (ALA158) [view usage] : a.56.1.0 |CO dehydrogenase ISP C-domain like |CO dehydrogenase ISP C-domain like |automated matches |automated matches |Eubacterium barkeri [TaxId: 1528]
d1ffua1 : (HIS87) (GLU157) [view usage] : a.56.1.1 |CO dehydrogenase ISP C-domain like |CO dehydrogenase ISP C-domain like |CO dehydrogenase ISP C-domain like |Carbon monoxide (CO) dehydrogenase iron-sulfur protein, C-domain |Hydrogenophaga pseudoflava [TaxId: 47421]
d2b1ua_ : (LEU80) (GLN145) [view usage] : a.39.1.0 |EF Hand-like |EF-hand |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4ez9a2 : (ILE681) (SER742) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |automated matches |Geobacillus kaustophilus [TaxId: 1462]
d3hrdh2 : (SER87) (CYS155) [view usage] : a.56.1.0 |CO dehydrogenase ISP C-domain like |CO dehydrogenase ISP C-domain like |automated matches |automated matches |Eubacterium barkeri [TaxId: 1528]
d3o0gd_ : (SER147) (TYR236) [view usage] : a.74.1.1 |Cyclin-like |Cyclin-like |Cyclin |CDK5 activator 1 (NCK5a, p25) |Human (Homo sapiens) [TaxId: 9606]
d4dqpd2 : (ILE681) (PHE743) [view usage] : e.8.1.1 |DNA/RNA polymerases |DNA/RNA polymerases |DNA polymerase I |automated matches |Geobacillus kaustophilus [TaxId: 235909]
d1h8ba_ : (ASP5) (GLY69) [view usage] : a.39.1.7 |EF Hand-like |EF-hand |EF-hand modules in multidomain proteins |alpha-Actinin |Human (Homo sapiens) [TaxId: 9606]
d1h4ld_ : (SER149) (GLY238) [view usage] : a.74.1.1 |Cyclin-like |Cyclin-like |Cyclin |CDK5 activator 1 (NCK5a, p25) |Human (Homo sapiens) [TaxId: 9606]
d1juda_ : (HIS19) (LEU94) [view usage] : c.108.1.1 |HAD-like |HAD-like |HAD-related |L-2-Haloacid dehalogenase, HAD |Pseudomonas sp., strain YL [TaxId: 306]
d2m7ka_ : (ALA4) (PHE61) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |automated matches |Entamoeba histolytica [TaxId: 294381]
d1ungd_ : (SER149) (TYR236) [view usage] : a.74.1.1 |Cyclin-like |Cyclin-like |Cyclin |CDK5 activator 1 (NCK5a, p25) |Human (Homo sapiens) [TaxId: 9606]
d2eama_ : (VAL15) (LEU73) [view usage] : a.60.1.0 |SAM domain-like |SAM/Pointed domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4ovnb_ : (GLU83) (ALA148) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calmodulin |Human (Homo sapiens) [TaxId: 9606]
d4qnhr_ : (GLU83) (THR146) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Calmodulin |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4pwvb_ : (ASN10) (GLY79) [view usage] : a.28.1.0 |Acyl carrier protein-like |ACP-like |automated matches |automated matches |Streptomyces sp. [TaxId: 1001349]
d4f5sa1 : (SER5) (VAL77) [view usage] : a.126.1.0 |Serum albumin-like |Serum albumin-like |automated matches |automated matches |Cow (Bos taurus) [TaxId: 9913]
d1fpqa1 : (GLU21) (SER96) [view usage] : a.4.5.29 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |Plant O-methyltransferase, N-terminal domain |Chalcone O-methyltransferase |Alfalfa (Medicago sativa) [TaxId: 3879]
d1no1a_ : (ILE2) (LYS67) [view usage] : a.179.1.1 |Replisome organizer (g39p helicase loader/inhibitor protein) |Replisome organizer (g39p helicase loader/inhibitor protein) |Replisome organizer (g39p helicase loader/inhibitor protein) |Replisome organizer (g39p helicase loader/inhibitor protein) |Bacteriophage Spp1 [TaxId: 10724]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, c.108, a.126, a.4, a.39, a.74, a.60, a.28, a.56, a.199, a.179