Tableau information
Concept source: d1wjza_ amino acid (a.a.) range (ASP17)(ARG88)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP17) (GLY23) H1
(ASN29) (GLN49) H2
(PRO54) (ASN77) H3
(ASN77) (ARG88) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 60.5° H2
H3 -126.2° -153.6° H3
H4 -114.4° 105.2° -94.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3dabc_ : (LEU31) (VAL107) [view usage] : a.42.1.0 |SWIB/MDM2 domain |SWIB/MDM2 domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1uhra_ : (ASP15) (LEU82) [view usage] : a.42.1.1 |SWIB/MDM2 domain |SWIB/MDM2 domain |SWIB/MDM2 domain |SWI/SNF related regulator of chromatin (BRG1-associated factor 60a) |Mouse (Mus musculus) [TaxId: 10090]
d2lo1a_ : (TYR8) (GLY68) [view usage] : a.2.3.0 |Long alpha-hairpin |Chaperone J-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3jzqa_ : (LYS30) (ASN105) [view usage] : a.42.1.0 |SWIB/MDM2 domain |SWIB/MDM2 domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2dmxa_ : (ASN10) (GLY76) [view usage] : a.2.3.0 |Long alpha-hairpin |Chaperone J-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ocha_ : (GLY6) (GLY68) [view usage] : a.2.3.0 |Long alpha-hairpin |Chaperone J-domain |automated matches |automated matches |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d1rv1a_ : (PRO32) (LEU107) [view usage] : a.42.1.1 |SWIB/MDM2 domain |SWIB/MDM2 domain |SWIB/MDM2 domain |MDM2 |Human (Homo sapiens) [TaxId: 9606]
d1fpoa1 : (ASP2) (GLY76) [view usage] : a.2.3.1 |Long alpha-hairpin |Chaperone J-domain |Chaperone J-domain |HSC20 (HSCB), N-terminal (J) domain |Escherichia coli [TaxId: 562]
d4rwua_ : (LYS6) (GLY68) [view usage] : a.2.3.0 |Long alpha-hairpin |Chaperone J-domain |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
d2ctra_ : (SER8) (GLY72) [view usage] : a.2.3.0 |Long alpha-hairpin |Chaperone J-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3ucsd_ : (ASP5) (HIS71) [view usage] : a.2.3.0 |Long alpha-hairpin |Chaperone J-domain |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1sk8a_ : (GLU232) (TYR282) [view usage] : c.60.1.2 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Histidine acid phosphatase |Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) |Aspergillus fumigatus [TaxId: 5085]
d1q80a_ : (SER1) (GLY66) [view usage] : a.39.1.5 |EF Hand-like |EF-hand |Calmodulin-like |Sarcoplasmic calcium-binding protein |Sandworm (Nereis diversicolor) [TaxId: 126592]
d4jsca_ : (THR27) (LEU103) [view usage] : a.42.1.1 |SWIB/MDM2 domain |SWIB/MDM2 domain |SWIB/MDM2 domain |MDM2 |African clawed frog (Xenopus laevis) [TaxId: 8355]
d2gv2a_ : (PRO32) (LEU107) [view usage] : a.42.1.1 |SWIB/MDM2 domain |SWIB/MDM2 domain |SWIB/MDM2 domain |MDM2 |Human (Homo sapiens) [TaxId: 9606]
d1hiws_ : (LEU64) (ASN109) [view usage] : a.61.1.1 |Retroviral matrix proteins |Retroviral matrix proteins |Immunodeficiency virus matrix proteins |HIV-1 matrix protein (HIV-1 MA, HIVp17, p17, MA) |Human immunodeficiency virus type 1 [TaxId: 11676]
d2ej7a_ : (ASP10) (ARG74) [view usage] : a.2.3.0 |Long alpha-hairpin |Chaperone J-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2cuga_ : (ASP18) (GLY82) [view usage] : a.2.3.0 |Long alpha-hairpin |Chaperone J-domain |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d4mdqa_ : (PRO32) (LEU107) [view usage] : a.42.1.1 |SWIB/MDM2 domain |SWIB/MDM2 domain |SWIB/MDM2 domain |MDM2 |Human (Homo sapiens) [TaxId: 9606]
d2ctpa_ : (ASP8) (PHE71) [view usage] : a.2.3.0 |Long alpha-hairpin |Chaperone J-domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1v32a_ : (SER17) (HIS89) [view usage] : a.42.1.1 |SWIB/MDM2 domain |SWIB/MDM2 domain |SWIB/MDM2 domain |Hypothetical protein AT5G08430 (rafl09-47-k03) |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d3ucsc_ : (ASP5) (ARG72) [view usage] : a.2.3.0 |Long alpha-hairpin |Chaperone J-domain |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1wjza_ : (ASP17) (ARG88) [view usage] : a.2.3.1 |Long alpha-hairpin |Chaperone J-domain |Chaperone J-domain |CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) |Mouse (Mus musculus) [TaxId: 10090]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.60, a.39, a.42, a.61, a.2