Tableau information
Concept source: d4adlb_ amino acid (a.a.) range (TYR418)(LYS465)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(TYR418) (LYS430) H1
(THR434) (GLY443) H2
(SER450) (ASP459) H3
(ASP459) (LYS465) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 113.7° H2
H3 -75.0° 154.0° H3
H4 -140.4° 97.6° -66.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1kb2a_ : (ARG73) (ARG110) [view usage] : g.39.1.2 |Glucocorticoid receptor-like (DNA-binding domain) |Glucocorticoid receptor-like (DNA-binding domain) |Nuclear receptor |Vitamin D3 receptor, VDR, DNA-binding domain |Human (Homo sapiens) [TaxId: 9606]
d3sz3a_ : (THR260) (GLY333) [view usage] : c.26.1.1 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Class I aminoacyl-tRNA synthetases (RS), catalytic domain |automated matches |Vibrio cholerae [TaxId: 243277]
d3kmqa_ : (PRO436) (HIS476) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |Viral RNA polymerase |Foot-and-mouth disease virus - type c [TaxId: 12116]
d1is2a2 : (LYS613) (GLU645) [view usage] : a.29.3.2 |Bromodomain-like |Acyl-CoA dehydrogenase C-terminal domain-like |acyl-CoA oxidase C-terminal domains |Peroxisomal acyl-CoA oxidase-II, domains 3 and 4 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3puvf2 : (LYS314) (ALA353) [view usage] : f.58.1.1 |MetI-like |MetI-like |MetI-like |Maltose transport system permease protein MalF |Escherichia coli [TaxId: 562]
d4adlb_ : (TYR418) (LYS465) [view usage] : a.127.1.0 |L-aspartase-like |L-aspartase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d1kb4a_ : (ARG73) (GLU114) [view usage] : g.39.1.2 |Glucocorticoid receptor-like (DNA-binding domain) |Glucocorticoid receptor-like (DNA-binding domain) |Nuclear receptor |Vitamin D3 receptor, VDR, DNA-binding domain |Human (Homo sapiens) [TaxId: 9606]
d3rrpa_ : (TYR417) (LYS464) [view usage] : a.127.1.0 |L-aspartase-like |L-aspartase-like |automated matches |automated matches |Mycobacterium abscessus [TaxId: 561007]
d3qyia_ : (PRO272) (TYR315) [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |MAP kinase Erk2 |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1r36a_ : (LYS305) (SER355) [view usage] : a.4.5.21 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ets domain |ETS-1 transcription factor, residues 331-440 |Mouse (Mus musculus) [TaxId: 10090]
d1a26a1 : (LYS667) (ILE740) [view usage] : a.41.1.1 |Domain of poly(ADP-ribose) polymerase |Domain of poly(ADP-ribose) polymerase |Domain of poly(ADP-ribose) polymerase |Domain of poly(ADP-ribose) polymerase |Chicken (Gallus gallus) [TaxId: 9031]
d3fr7a2 : (ILE359) (PHE422) [view usage] : a.100.1.2 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |Acetohydroxy acid isomeroreductase (ketol-acid reductoisomerase, KARI) |automated matches |Oryza sativa [TaxId: 39947]
d2xkra_ : (ASP311) (LEU364) [view usage] : a.104.1.0 |Cytochrome P450 |Cytochrome P450 |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d4e78a_ : (SER478) (LEU545) [view usage] : e.8.1.4 |DNA/RNA polymerases |DNA/RNA polymerases |RNA-dependent RNA-polymerase |Viral RNA polymerase |Hepatitis C virus [TaxId: 356411]
d3s4tb_ : (ASP287) (LEU321) [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |automated matches |Polaromonas sp. [TaxId: 296591]
d3fr7b2 : (ILE1359) (PHE1422) [view usage] : a.100.1.2 |6-phosphogluconate dehydrogenase C-terminal domain-like |6-phosphogluconate dehydrogenase C-terminal domain-like |Acetohydroxy acid isomeroreductase (ketol-acid reductoisomerase, KARI) |automated matches |Oryza sativa [TaxId: 39947]
d3d5ka_ : (PRO34) (ASP83) [view usage] : f.5.1.1 |Outer membrane efflux proteins (OEP) |Outer membrane efflux proteins (OEP) |Outer membrane efflux proteins (OEP) |Outer membrane protein OprM |Pseudomonas aeruginosa [TaxId: 287]
d2hmjb_ : (ASN4) (GLU55) [view usage] : d.17.4.4 |Cystatin-like |NTF2-like |Ring hydroxylating beta subunit |Naphthalene 1,2-dioxygenase beta subunit |Pseudomonas sp. [TaxId: 306]
d3r6va_ : (THR420) (HIS461) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |L-aspartate ammonia lyase |Bacillus sp., ym55-1 [TaxId: 1409]
d4adla_ : (TYR418) (LYS465) [view usage] : a.127.1.0 |L-aspartase-like |L-aspartase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d3tv2a_ : (ASP559) (VAL600) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |automated matches |Burkholderia pseudomallei [TaxId: 320372]
d2dvtb_ : (ASP287) (PHE322) [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |Thermophilic reversible gamma-resorcylate decarboxylase |Rhizobium sp. MTP-10005 [TaxId: 267998]
d3s4ta_ : (ASP287) (LEU321) [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |automated matches |Polaromonas sp. [TaxId: 296591]
d4qs5c_ : (ASN314) (TRP348) [view usage] : c.1.9.0 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |automated matches |automated matches |Novosphingobium aromaticivorans [TaxId: 279238]
d4apba_ : (TYR418) (LYS465) [view usage] : a.127.1.0 |L-aspartase-like |L-aspartase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
d2jr2a_ : (SER8) (HIS73) [view usage] : a.284.1.1 |YejL-like |YejL-like |YejL-like |Hypothetical protein CPS2611 |Colwellia psychrerythraea [TaxId: 28229]
d1re5d_ : (ASP7) (CYS57) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |3-carboxy-cis,cis-muconate cycloisomerase (CMLE) |Pseudomonas putida, strain KT2440 [TaxId: 303]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, c.1, a.104, c.26, a.127, d.144, d.17, a.100, a.4, a.29, f.58, g.39, a.284, a.41, f.5