Tableau information
Concept source: d3h1hj_ amino acid (a.a.) range (LEU6)(TYR59)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU6) (ALA12) H1
(ARG16) (ASN47) H2
(LEU51) (ILE55) H3
(ILE55) (TYR59) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 123.9° H2
H3 100.6° -51.0° H3
H4 59.0° 72.3° -44.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3d6nb2 : (ASN254) (TRP290) [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Aquifex aeolicus [TaxId: 63363]
d4ewga1 : (PRO63) (GLY99) [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Burkholderia phymatum [TaxId: 391038]
d2odeb_ : (ASP114) (SER175) [view usage] : a.91.1.1 |Regulator of G-protein signaling, RGS |Regulator of G-protein signaling, RGS |Regulator of G-protein signaling, RGS |automated matches |Human (Homo sapiens) [TaxId: 9606]
d7mdhc2 : (PRO246) (GLY277) [view usage] : d.162.1.1 |LDH C-terminal domain-like |LDH C-terminal domain-like |Lactate & malate dehydrogenases, C-terminal domain |Malate dehydrogenase |Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
d3h1hj_ : (LEU6) (TYR59) [view usage] : f.23.14.1 |Single transmembrane helix |Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d3tpfa2 : (TYR264) (GLN302) [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
d2a72a_ : (ASP400) (ALA450) [view usage] : a.91.1.0 |Regulator of G-protein signaling, RGS |Regulator of G-protein signaling, RGS |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1hj4a1 : (SER50) (TYR100) [view usage] : a.3.1.2 |Cytochrome c |Cytochrome c |N-terminal (heme c) domain of cytochrome cd1-nitrite reductase |N-terminal (heme c) domain of cytochrome cd1-nitrite reductase |Paracoccus pantotrophus [TaxId: 82367]
d1c50a_ : (GLY748) (LYS792) [view usage] : c.87.1.4 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Oligosaccharide phosphorylase |Glycogen phosphorylase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
d1s1il_ : (ASN148) (GLN193) [view usage] : i.1.1.1 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Ribosome complexes |Eukaryotic, cytoplasmic (80S ribosome functional complex) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1fgja_ : (SER346) (PHE428) [view usage] : a.138.1.3 |Multiheme cytochromes |Multiheme cytochromes |Di-heme elbow motif |Hydroxylamine oxidoreductase, HAO |Nitrosomonas europaea [TaxId: 915]
d3b5ra_ : (GLN824) (SER888) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Androgen receptor |Human (Homo sapiens) [TaxId: 9606]
d1kz7a1 : (ALA668) (CYS704) [view usage] : a.87.1.1 |DBL homology domain (DH-domain) |DBL homology domain (DH-domain) |DBL homology domain (DH-domain) |Dbl's big sister, Dbs |Mouse (Mus musculus) [TaxId: 10090]
d7mdha2 : (PRO246) (GLY277) [view usage] : d.162.1.1 |LDH C-terminal domain-like |LDH C-terminal domain-like |Lactate & malate dehydrogenases, C-terminal domain |Malate dehydrogenase |Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
d4ki0g_ : (SER136) (THR183) [view usage] : f.58.1.1 |MetI-like |MetI-like |MetI-like |Maltose transport system permease protein MalG |Escherichia coli [TaxId: 562]
d1j36a_ : (LYS495) (CYS540) [view usage] : d.92.1.5 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neurolysin-like |Angiotensin converting enzyme, ACE |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d3lg3a_ : (ALA354) (GLY394) [view usage] : c.1.12.7 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |Phosphoenolpyruvate mutase/Isocitrate lyase-like |automated matches |Yersinia pestis [TaxId: 632]
d7mdhd2 : (PRO246) (GLY277) [view usage] : d.162.1.1 |LDH C-terminal domain-like |LDH C-terminal domain-like |Lactate & malate dehydrogenases, C-terminal domain |Malate dehydrogenase |Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
d4h80a_ : (GLN39) (ALA82) [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2c6fb_ : (ASN460) (PHE505) [view usage] : d.92.1.0 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1s72m_ : (ALA152) (GLY191) [view usage] : d.12.1.2 |Ribosomal proteins S24e, L23 and L15e |Ribosomal proteins S24e, L23 and L15e |L15e |Ribosomal protein L15e |Haloarcula marismortui [TaxId: 2238]
d4po5a_ : (SER2) (HIS62) [view usage] : a.1.1.0 |Globin-like |Globin-like |automated matches |automated matches |Synechocystis sp. [TaxId: 1111708]
d1co0a_ : (GLU70) (LEU104) [view usage] : a.4.12.1 |DNA/RNA-binding 3-helical bundle |TrpR-like |Trp repressor, TrpR |Trp repressor, TrpR |Escherichia coli [TaxId: 562]
d3tpfb2 : (TYR264) (GLN302) [view usage] : c.78.1.0 |ATC-like |Aspartate/ornithine carbamoyltransferase |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
d3egwc_ : (GLY172) (ARG216) [view usage] : f.21.3.1 |Heme-binding four-helical bundle |Respiratory nitrate reductase 1 gamma chain |Respiratory nitrate reductase 1 gamma chain |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3nspa_ : (ALA387) (LEU455) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Retinoid-X receptor alpha (RXR-alpha) |Human (Homo sapiens) [TaxId: 9606]
d3qj3b_ : (PHE6) (GLY77) [view usage] : d.3.1.0 |Cysteine proteinases |Cysteine proteinases |automated matches |automated matches |Yellow mealworm (Tenebrio molitor) [TaxId: 7067]
d1gnta_ : (ASP77) (GLU140) [view usage] : e.26.1.1 |Prismane protein-like |Prismane protein-like |Hybrid cluster protein (prismane protein) |Hybrid cluster protein (prismane protein) |Desulfovibrio vulgaris [TaxId: 881]
d3szaa_ : (GLN39) (ALA82) [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3qj3a_ : (SER4) (GLY77) [view usage] : d.3.1.0 |Cysteine proteinases |Cysteine proteinases |automated matches |automated matches |Yellow mealworm (Tenebrio molitor) [TaxId: 7067]
d2ehba_ : (SER148) (THR201) [view usage] : a.39.1.0 |EF Hand-like |EF-hand |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d2oa5b_ : (ASP7) (LEU92) [view usage] : d.362.1.1 |BLRF2-like |BLRF2-like |BLRF2-like |Uncharacterized protein BQLF2 |Murid herpesvirus 4 [TaxId: 33708]
d4k29a_ : (ASP203) (ARG267) [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Xanthobacter autotrophicus [TaxId: 78245]
d1ejba_ : (GLU130) (PHE168) [view usage] : c.16.1.1 |Lumazine synthase |Lumazine synthase |Lumazine synthase |Lumazine synthase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3d5ta2 : (SER205) (GLY236) [view usage] : d.162.1.0 |LDH C-terminal domain-like |LDH C-terminal domain-like |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 320372]
d1aoqa1 : (SER50) (TYR100) [view usage] : a.3.1.2 |Cytochrome c |Cytochrome c |N-terminal (heme c) domain of cytochrome cd1-nitrite reductase |N-terminal (heme c) domain of cytochrome cd1-nitrite reductase |Paracoccus pantotrophus [TaxId: 82367]
d2uumb_ : (ASP3) (GLU62) [view usage] : a.1.1.3 |Globin-like |Globin-like |Phycocyanin-like phycobilisome proteins |automated matches |Spirulina sp. [TaxId: 1157]
d1sqqj_ : (THR6) (ASN61) [view usage] : f.23.14.1 |Single transmembrane helix |Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) |Cow (Bos taurus) [TaxId: 9913]
d1re5d_ : (PRO410) (PHE448) [view usage] : a.127.1.1 |L-aspartase-like |L-aspartase-like |L-aspartase/fumarase |3-carboxy-cis,cis-muconate cycloisomerase (CMLE) |Pseudomonas putida, strain KT2440 [TaxId: 303]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, i.1, c.82, d.92, c.14, a.127, c.95, d.3, c.87, a.123, c.78, f.21, c.16, a.1, a.4, a.39, d.162, a.138, e.26, a.3,
a.91, a.87, f.58, f.23, d.12, d.362