Tableau information
Concept source: d1kt1a1 amino acid (a.a.) range (ASP260)(ASP347)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP260) (GLY282) H1
(TYR284) (GLU301) H2
(SER305) (ARG331) H3
(TYR333) (ASP347) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -157.1° H2
H3 23.2° -148.8° H3
H4 -138.3° 35.0° -156.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3rf1b_ : (HIS193) (LEU283) [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |automated matches |Campylobacter jejuni [TaxId: 354242]
d2goxa_ : (PRO1020) (LYS1111) [view usage] : a.102.4.4 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Complement components |Thio-ester containing domain (TED) from Complement C3, aka C3d or C3dg |Human (Homo sapiens) [TaxId: 9606]
d1upth_ : (PHE2175) (ALA2218) [view usage] : a.193.1.1 |GRIP domain |GRIP domain |GRIP domain |Golgi autoantigen, golgin-245 |Human (Homo sapiens) [TaxId: 9606]
d1zbpa1 : (GLN3) (LEU60) [view usage] : e.61.1.1 |ImpE-like |ImpE-like |ImpE-like |Hypothetical protein VPA1032 |Vibrio parahaemolyticus [TaxId: 670]
d175lb_ : (LYS85) (SER136) [view usage] : d.2.1.3 |Lysozyme-like |Lysozyme-like |Phage lysozyme |Phage T4 lysozyme |Bacteriophage T4 [TaxId: 10665]
d1occe_ : (THR7) (GLY76) [view usage] : a.118.11.1 |alpha-alpha superhelix |Cytochrome c oxidase subunit E |Cytochrome c oxidase subunit E |Cytochrome c oxidase subunit E |Cow (Bos taurus) [TaxId: 9913]
d4av7a1 : (ASP462) (ARG529) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Pseudomonas sp. [TaxId: 1007495]
d3rdha_ : (LYS138) (SER230) [view usage] : a.118.7.1 |alpha-alpha superhelix |14-3-3 protein |14-3-3 protein |zeta isoform |Human (Homo sapiens) [TaxId: 9606]
d1hm6a_ : (ASN195) (THR272) [view usage] : a.65.1.1 |Annexin |Annexin |Annexin |Annexin I |Pig (Sus scrofa) [TaxId: 9823]
d3rf1a_ : (HIS193) (LEU283) [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |automated matches |Campylobacter jejuni [TaxId: 354242]
d1i94t_ : (LEU13) (SER105) [view usage] : a.7.6.1 |Spectrin repeat-like |Ribosomal protein S20 |Ribosomal protein S20 |Ribosomal protein S20 |Thermus thermophilus [TaxId: 274]
d3p1ra_ : (SER149) (TRP230) [view usage] : a.118.7.1 |alpha-alpha superhelix |14-3-3 protein |14-3-3 protein |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1h54b1 : (LEU597) (THR654) [view usage] : a.102.1.4 |alpha/alpha toroid |Six-hairpin glycosidases |Glycosyltransferase family 36 C-terminal domain |Lactobacillus maltose phosphorylase, central domain |Lactobacillus brevis [TaxId: 1580]
d2c74a_ : (GLY2) (ASP105) [view usage] : a.118.7.1 |alpha-alpha superhelix |14-3-3 protein |14-3-3 protein |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1s7ea2 : (THR9) (LEU80) [view usage] : a.35.1.7 |lambda repressor-like DNA-binding domains |lambda repressor-like DNA-binding domains |CUT domain |Hepatocyte nuclear factor 6 |Mouse (Mus musculus) [TaxId: 10090]
d2a8za1 : (ARG284) (PHE364) [view usage] : a.102.1.2 |alpha/alpha toroid |Six-hairpin glycosidases |Cellulases catalytic domain |Endo-1,4-beta-xylanase |Pseudoalteromonas haloplanktis [TaxId: 228]
d1v5ca_ : (PRO54) (LYS156) [view usage] : a.102.1.2 |alpha/alpha toroid |Six-hairpin glycosidases |Cellulases catalytic domain |Chitosanase |Bacillus sp., strain k17 [TaxId: 1409]
d1hx8a1 : (ALA175) (LEU299) [view usage] : a.7.8.2 |Spectrin repeat-like |GAT-like domain |Phosphoinositide-binding clathrin adaptor, domain 2 |AP180 (Lap) |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d3p2ca_ : (GLU185) (LYS324) [view usage] : a.102.1.8 |alpha/alpha toroid |Six-hairpin glycosidases |CPF0428-like |automated matches |Bacteroides ovatus [TaxId: 411476]
d1apca_ : (LEU3) (LEU94) [view usage] : a.24.3.1 |Four-helical up-and-down bundle |Cytochromes |Cytochrome b562 |Cytochrome b562 |Escherichia coli [TaxId: 562]
d1s0pa_ : (LYS114) (THR210) [view usage] : a.192.1.1 |N-terminal domain of adenylylcyclase associated protein, CAP |N-terminal domain of adenylylcyclase associated protein, CAP |N-terminal domain of adenylylcyclase associated protein, CAP |N-terminal domain of adenylylcyclase associated protein, CAP |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
d1r5aa1 : (ASP125) (ARG213) [view usage] : a.45.1.1 |GST C-terminal domain-like |GST C-terminal domain-like |Glutathione S-transferase (GST), C-terminal domain |Class delta GST |Mosquito (Anopheles dirus b), isozyme 1-5 [TaxId: 123217]
d1n4pb_ : (SER241) (LEU331) [view usage] : a.102.4.3 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Protein prenyltransferases |Protein farnesyltransferase, beta-subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2ktqa1 : (LEU352) (LEU420) [view usage] : c.55.3.5 |Ribonuclease H-like motif |Ribonuclease H-like |DnaQ-like 3'-5' exonuclease |Exonuclease domain of prokaryotic DNA polymerase |Thermus aquaticus [TaxId: 271]
d2j4bb_ : (ASP17) (PHE86) [view usage] : d.379.1.1 |Taf5 N-terminal domain-like |Taf5 N-terminal domain-like |Taf5 N-terminal domain-like |automated matches |Fungus (Encephalitozoon cuniculi) [TaxId: 6035]
d1w6ja2 : (PHE103) (GLY184) [view usage] : a.102.4.2 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Terpene synthases |Lanosterol synthase |Human (Homo sapiens) [TaxId: 9606]
d1uptf_ : (PHE2175) (LEU2224) [view usage] : a.193.1.1 |GRIP domain |GRIP domain |GRIP domain |Golgi autoantigen, golgin-245 |Human (Homo sapiens) [TaxId: 9606]
d1gsza2 : (VAL40) (GLY121) [view usage] : a.102.4.2 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Terpene synthases |Squalene-hopene cyclase |Alicyclobacillus acidocaldarius [TaxId: 405212]
d1r5id_ : (THR25) (ASN125) [view usage] : a.202.1.1 |Superantigen MAM |Superantigen MAM |Superantigen MAM |Superantigen MAM |Mycoplasma arthritidis [TaxId: 2111]
d1dceb_ : (ARG46) (SER125) [view usage] : a.102.4.3 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Protein prenyltransferases |Rab geranylgeranyltransferase, beta subunit |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4axhb1 : (GLY460) (HIS530) [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Pseudomonas sp. [TaxId: 1007495]
d1wola_ : (ARG3) (LEU62) [view usage] : a.24.16.0 |Four-helical up-and-down bundle |Nucleotidyltransferase substrate binding subunit/domain |automated matches |automated matches |Sulfolobus tokodaii [TaxId: 273063]
d2q7fa1 : (ASP127) (GLN189) [view usage] : a.118.8.1 |alpha-alpha superhelix |TPR-like |Tetratricopeptide repeat (TPR) |automated matches |Bacillus subtilis [TaxId: 1423]
d2vglb_ : (ILE15) (ALA77) [view usage] : a.118.1.10 |alpha-alpha superhelix |ARM repeat |Clathrin adaptor core protein |Adaptin beta subunit N-terminal fragment |Human (Homo sapiens) [TaxId: 9606]
d3m8na2 : (THR84) (GLN192) [view usage] : a.45.1.0 |GST C-terminal domain-like |GST C-terminal domain-like |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 1076]
d2j4bc_ : (LYS16) (TYR90) [view usage] : d.379.1.1 |Taf5 N-terminal domain-like |Taf5 N-terminal domain-like |Taf5 N-terminal domain-like |automated matches |Fungus (Encephalitozoon cuniculi) [TaxId: 6035]
d2o9xa1 : (LYS79) (LYS153) [view usage] : a.184.1.1 |TorD-like |TorD-like |TorD-like |Reductase assembly protein AF0173 |Archaeoglobus fulgidus [TaxId: 2234]
d3eqaa_ : (ALA270) (LEU378) [view usage] : a.102.1.1 |alpha/alpha toroid |Six-hairpin glycosidases |Glucoamylase |automated matches |Aspergillus niger [TaxId: 5061]
d1xnfa_ : (SER211) (GLN283) [view usage] : a.118.8.1 |alpha-alpha superhelix |TPR-like |Tetratricopeptide repeat (TPR) |Lipoprotein NlpI |Escherichia coli [TaxId: 562]
d2ahfa_ : (ASP41) (TRP124) [view usage] : a.102.1.7 |alpha/alpha toroid |Six-hairpin glycosidases |Glycosyl Hydrolase Family 88 |automated matches |Bacillus sp. [TaxId: 84635]
d1h54a1 : (LEU597) (ARG656) [view usage] : a.102.1.4 |alpha/alpha toroid |Six-hairpin glycosidases |Glycosyltransferase family 36 C-terminal domain |Lactobacillus maltose phosphorylase, central domain |Lactobacillus brevis [TaxId: 1580]
d1v8ga1 : (ALA3) (ALA63) [view usage] : a.46.2.1 |Methionine synthase domain-like |Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain |Anthranilate phosphoribosyltransferase (TrpD) |Thermus thermophilus [TaxId: 274]
d2y69e_ : (THR7) (GLY76) [view usage] : a.118.11.1 |alpha-alpha superhelix |Cytochrome c oxidase subunit E |Cytochrome c oxidase subunit E |automated matches |Cow (Bos taurus) [TaxId: 9913]
d1vd5a_ : (ASP41) (MET121) [view usage] : a.102.1.7 |alpha/alpha toroid |Six-hairpin glycosidases |Glycosyl Hydrolase Family 88 |Unsaturated glucuronyl hydrolase |Bacillus sp. GL1 [TaxId: 84635]
d1uptb_ : (PHE2175) (LEU2224) [view usage] : a.193.1.1 |GRIP domain |GRIP domain |GRIP domain |Golgi autoantigen, golgin-245 |Human (Homo sapiens) [TaxId: 9606]
d3om3a_ : (LEU227) (TRP371) [view usage] : f.24.1.1 |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |Cytochrome c oxidase subunit I-like |automated matches |Rhodobacter sphaeroides [TaxId: 272943]
d4u2nb1 : (LYS39) (GLN100) [view usage] : d.42.1.0 |POZ domain |POZ domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2zzra_ : (GLU68) (TYR151) [view usage] : a.102.1.0 |alpha/alpha toroid |Six-hairpin glycosidases |automated matches |automated matches |Streptococcus agalactiae [TaxId: 1311]
d2pnoa1 : (ALA6) (LEU147) [view usage] : f.56.1.1 |MAPEG domain-like |MAPEG domain-like |MAPEG domain |Leukotriene C4 synthase |Human (Homo sapiens) [TaxId: 9606]
d3kpha_ : (THR25) (ASN125) [view usage] : a.202.1.1 |Superantigen MAM |Superantigen MAM |Superantigen MAM |automated matches |Mycoplasma arthritidis [TaxId: 2111]
d1ee5a_ : (LYS228) (ARG299) [view usage] : a.118.1.1 |alpha-alpha superhelix |ARM repeat |Armadillo repeat |Karyopherin alpha |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2b5dx1 : (ASP417) (ALA513) [view usage] : a.8.3.3 |immunoglobulin/albumin-binding domain-like |Families 57/38 glycoside transferase middle domain |AmyC C-terminal domain-like |Alpha-amylase AmyC |Thermotoga maritima [TaxId: 2336]
d1r71c_ : (GLU196) (LEU250) [view usage] : a.4.14.1 |DNA/RNA-binding 3-helical bundle |KorB DNA-binding domain-like |KorB DNA-binding domain-like |Transcriptional repressor protein KorB DNA-binding domain |Escherichia coli [TaxId: 562]
d1kpsb_ : (SER511) (ILE589) [view usage] : a.118.12.1 |alpha-alpha superhelix |Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain |Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain |Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain |Mouse (Mus musculus) [TaxId: 10090]
d1v54e_ : (THR7) (GLY76) [view usage] : a.118.11.1 |alpha-alpha superhelix |Cytochrome c oxidase subunit E |Cytochrome c oxidase subunit E |Cytochrome c oxidase subunit E |Cow (Bos taurus) [TaxId: 9913]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.118, d.157, a.102, a.65, d.104, c.55, d.2, f.24, a.4, a.45, d.42, a.24, a.8, a.7, a.35, a.184, d.379, a.192, f.56, a.46,
a.202, a.193, e.61