Tableau information
Concept source: d1xiqa_ amino acid (a.a.) range (GLU42)(GLY77)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLU42) (HIS48) H1
(LYS50) (GLN55) H2
(PHE58) (GLY68) H3
(GLY68) (GLY77) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 83.4° H2
H3 126.6° 132.5° H3
E4 50.2° 133.4° -86.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1m6ex_ : (ASN303) (ASP359) [view usage] : c.66.1.35 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Salicylic acid carboxyl methyltransferase (SAMT) |Salicylic acid carboxyl methyltransferase (SAMT) |Clarkia breweri [TaxId: 36903]
d3q83a_ : (PRO41) (VAL74) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |automated matches |Staphylococcus aureus [TaxId: 93062]
d3udub_ : (GLY45) (SER74) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Campylobacter jejuni [TaxId: 197]
d1egna_ : (ASN327) (MET364) [view usage] : b.29.1.10 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolase family 7 catalytic core |Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) |Trichoderma reesei, Cel7A [TaxId: 51453]
d4di6a_ : (GLU46) (GLY86) [view usage] : d.58.6.0 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |automated matches |automated matches |Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]
d2z69b_ : (PHE3) (LYS39) [view usage] : b.82.3.0 |Double-stranded beta-helix |cAMP-binding domain-like |automated matches |automated matches |Pseudomonas aeruginosa
d1gpea2 : (GLU462) (HIS520) [view usage] : d.16.1.1 |FAD-linked reductases, C-terminal domain |FAD-linked reductases, C-terminal domain |GMC oxidoreductases |Glucose oxidase |Penicillium amagasakiense [TaxId: 63559]
d1fcdc1 : (PRO34) (PRO80) [view usage] : a.3.1.4 |Cytochrome c |Cytochrome c |Two-domain cytochrome c |Flavocytochrome c sulfide dehydrogenase, FCSD, cytochrome subunit |Chromatium vinosum [TaxId: 1049]
d1xdba_ : (MET58) (TYR80) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Nitrogenase iron protein |Azotobacter vinelandii [TaxId: 354]
d2hzba1 : (PRO69) (PRO124) [view usage] : c.143.1.1 |CofD-like |CofD-like |CofD-like |Hypothetical protein BH3568 |Bacillus halodurans [TaxId: 86665]
d2d4va_ : (GLN72) (GLY101) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Acidithiobacillus thiooxidans [TaxId: 930]
d3nv8b_ : (SER193) (GLU248) [view usage] : c.1.10.8 |TIM beta/alpha-barrel |Aldolase |Class-II DAHP synthetase |Probable DAHP synthetase AroG, phenylalanine-repressible |Mycobacterium tuberculosis [TaxId: 1773]
d1mopa_ : (GLY121) (ASP153) [view usage] : c.26.1.4 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Pantothenate synthetase (Pantoate-beta-alanine ligase, PanC) |Mycobacterium tuberculosis [TaxId: 1773]
d3etea1 : (ASN8) (LEU61) [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |automated matches |Cow (Bos taurus) [TaxId: 9913]
d1ne4a2 : (GLU245) (ASP276) [view usage] : b.82.3.2 |Double-stranded beta-helix |cAMP-binding domain-like |cAMP-binding domain |Regulatory subunit of Protein kinase A |Cow (Bos taurus) [TaxId: 9913]
d4c4ca_ : (ASN327) (MET364) [view usage] : b.29.1.10 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolase family 7 catalytic core |Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) |Trichoderma reesei, Cel7A [TaxId: 51453]
d1vq0a1 : (GLN182) (GLU226) [view usage] : d.193.1.1 |Hsp33 domain |Hsp33 domain |Hsp33 domain |Heat shock protein 33, Hsp33 |Thermotoga maritima [TaxId: 2336]
d3mvqa1 : (ASN8) (LEU61) [view usage] : c.58.1.1 |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenase-like, N-terminal domain |Aminoacid dehydrogenases |Glutamate dehydrogenase |Cow (Bos taurus) [TaxId: 9913]
d1akoa_ : (THR157) (THR198) [view usage] : d.151.1.1 |DNase I-like |DNase I-like |DNase I-like |DNA-repair enzyme exonuclease III |Escherichia coli [TaxId: 562]
d2hvea_ : (SER44) (GLY80) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |Human (Homo sapiens), NDKA [TaxId: 9606]
d3pj9d_ : (SER41) (ILE74) [view usage] : d.58.6.1 |Ferredoxin-like |Nucleoside diphosphate kinase, NDK |Nucleoside diphosphate kinase, NDK |automated matches |Campylobacter jejuni [TaxId: 192222]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, b.82, d.58, b.29, c.26, c.66, c.77, c.37, d.151, d.193, a.3, c.58, d.16, c.143