Protein Concepts Dictionary

Tableau information

Concept source:  d4iiua_  amino acid (a.a.) range (GLU194)(ASN239)

nSSEs in this Concept: 4

String of secondary struct.elems. (SSEs) defining this concept: HHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLU194)  (ILE205) H1
	  (ALA213)  (MET224) H2
	  (ASP226)  (VAL231) H3
	  (ARG233)  (ASN239) E4

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                          
H2       42.6°   H2                   
H3       78.3°  -86.4°   H3            
E4     -119.3°  155.9°  107.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3ojfa_ :   (ASP203)  (ASP249)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Enoyl-ACP reductase |Bacillus cereus [TaxId: 226900]
 d4iiub_ :   (GLU194)  (ASN239)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Escherichia coli [TaxId: 199310]
 d3o94b_ :    (HIS62)  (ARG104)   [view usage] : c.33.1.0 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 170187]
 d1ulsb_ :   (GLU191)  (ASP235)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |beta-keto acyl carrier protein reductase |Thermus thermophilus [TaxId: 274]
 d3t4xa_ :   (GLU217)  (ASP256)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
 d4o0la_ :   (LYS222)  (ASP266)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Rhodotorula mucilaginosa [TaxId: 5537]
 d3vzpc_ :   (GLN196)  (ASN240)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Cupriavidus necator [TaxId: 381666]
 d1w4za_ :   (SER209)  (CYS255)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |beta-keto acyl carrier protein reductase |Streptomyces coelicolor [TaxId: 1902]
 d1nxqa_ :   (GLN207)  (ASP245)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |R-specific alcohol dehydrogenase |Lactobacillus brevis [TaxId: 1580]
 d4iiua_ :   (GLU194)  (ASN239)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Escherichia coli [TaxId: 199310]
 d2uvda_ :   (ASP196)  (ASP241)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Bacillus anthracis [TaxId: 198094]
 d3afma_ :   (THR206)  (ASN252)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Sphingomonas sp. [TaxId: 90322]
 d1ulub_ :   (ALA215)  (ASP249)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Enoyl-ACP reductase |Thermus thermophilus [TaxId: 274]
 d4wecb_ :   (ASP201)  (ASP246)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
 d4weca_ :   (ASP201)  (ASP246)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.2,    c.33