Tableau information
Concept source: d2hgjm1 amino acid (a.a.) range (LEU87)(GLY125)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU87) (THR93) H1
(HIS94) (GLY105) H2
(GLY110) (ARG119) H3
(ARG119) (GLY125) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 118.1° H2
H3 -58.3° 141.3° H3
E4 -94.8° 144.6° -47.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2cfza2 : (PHE200) (PRO247) [view usage] : d.157.1.13 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Alkylsulfatase-like |Alkylsulfatase SdsA1 |Pseudomonas aeruginosa [TaxId: 287]
d1utea_ : (TYR55) (VAL87) [view usage] : d.159.1.1 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |Purple acid phosphatase-like |Mammalian purple acid phosphatase |Pig (Sus scrofa) [TaxId: 9823]
d2v9ga_ : (THR145) (PRO184) [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |automated matches |Escherichia coli [TaxId: 562]
d4lacb_ : (ASN273) (SER313) [view usage] : a.268.1.1 |PTPA-like |PTPA-like |PTPA-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4c2oa_ : (THR301) (GLU342) [view usage] : d.92.1.5 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neurolysin-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1vsah1 : (LEU110) (TYR146) [view usage] : c.21.1.1 |Ribosomal protein L13 |Ribosomal protein L13 |Ribosomal protein L13 |Ribosomal protein L13 |Thermus thermophilus [TaxId: 274]
d1orra_ : (ALA85) (THR125) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |CDP-tyvelose-2-epimerase |Salmonella typhi [TaxId: 90370]
d1k28d1 : (THR111) (ASN154) [view usage] : b.106.1.1 |Phage tail proteins |Phage tail proteins |Baseplate protein-like |Baseplate structural protein gp27 |Bacteriophage T4 [TaxId: 10665]
d3mqda1 : (ASP61) (GLY105) [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Brucella melitensis [TaxId: 359391]
d4a17i_ : (PHE47) (GLU105) [view usage] : i.1.1.2 |Ribosome and ribosomal fragments |Ribosome and ribosomal fragments |Large subunit |Eukaryotic, cytoplasmic (60S subunit) |Tetrahymena thermophila [TaxId: 5911]
d1j36a_ : (VAL285) (GLU326) [view usage] : d.92.1.5 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neurolysin-like |Angiotensin converting enzyme, ACE |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d1pvta_ : (LEU127) (GLU164) [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |Putative sugar-phosphate aldolase |Thermotoga maritima [TaxId: 2336]
d2cg2a2 : (VAL209) (PRO247) [view usage] : d.157.1.13 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Alkylsulfatase-like |Alkylsulfatase SdsA1 |Pseudomonas aeruginosa [TaxId: 287]
d1e6va2 : (THR215) (MET266) [view usage] : d.58.31.2 |Ferredoxin-like |Methyl-coenzyme M reductase subunits |Methyl-coenzyme M reductase alpha and beta chain N-terminal domain |Alpha chain |Methanopyrus kandleri [TaxId: 2320]
d3dl5d2 : (LEU193) (GLU255) [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |automated matches |Cryptosporidium hominis [TaxId: 237895]
d1peaa_ : (PRO263) (ASP321) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Amide receptor/negative regulator of the amidase operon (AmiC) |Pseudomonas aeruginosa [TaxId: 287]
d4kc6a_ : (ILE2) (GLU61) [view usage] : d.67.3.0 |RRF/tRNA synthetase additional domain-like |Ribosome recycling factor, RRF |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d3bkka_ : (THR301) (GLU342) [view usage] : d.92.1.5 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neurolysin-like |Angiotensin converting enzyme, ACE |Human (Homo sapiens) [TaxId: 9606]
d3gz4a_ : (ALA198) (GLN241) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Escherichia coli [TaxId: 217992]
d4ca5a_ : (THR301) (GLU342) [view usage] : d.92.1.5 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neurolysin-like |Angiotensin converting enzyme, ACE |Human (Homo sapiens) [TaxId: 9606]
d2p9sb_ : (GLY305) (ASP346) [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin-related protein 2, Arp2 |Cow (Bos taurus) [TaxId: 9913]
d1hbmb2 : (SER118) (MET178) [view usage] : d.58.31.2 |Ferredoxin-like |Methyl-coenzyme M reductase subunits |Methyl-coenzyme M reductase alpha and beta chain N-terminal domain |Beta chain |Methanobacterium thermoautotrophicum [TaxId: 145262]
d2bq8x_ : (TYR53) (ALA87) [view usage] : d.159.1.1 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |Purple acid phosphatase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1q19a1 : (SER298) (GLY344) [view usage] : c.26.2.1 |Adenine nucleotide alpha hydrolase-like |Adenine nucleotide alpha hydrolases-like |N-type ATP pyrophosphatases |beta-Lactam synthetase |Pectobacterium carotovorum [TaxId: 554]
d2j01n1 : (LEU87) (ALA124) [view usage] : c.21.1.1 |Ribosomal protein L13 |Ribosomal protein L13 |Ribosomal protein L13 |Ribosomal protein L13 |Thermus thermophilus [TaxId: 274]
d1r42a_ : (VAL293) (THR334) [view usage] : d.92.1.5 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |Neurolysin-like |Angiotensin converting enzyme 2, ACE2 |Human (Homo sapiens) [TaxId: 9606]
d3nxqb_ : (VAL279) (GLU320) [view usage] : d.92.1.0 |Zincin-like |Metalloproteases ("zincins"), catalytic domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3dh1b_ : (GLU61) (THR103) [view usage] : c.97.1.0 |Cytidine deaminase-like |Cytidine deaminase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3qe2b2 : (GLY415) (SER460) [view usage] : b.43.4.1 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |NADPH-cytochrome p450 reductase FAD-binding domain-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.2, d.159, d.58, i.1, c.26, d.157, d.117, d.92, c.93, c.74, c.55, c.95, c.97, d.67, b.43, a.268, b.106, c.21