Protein Concepts Dictionary

Tableau information

Concept source:  d4iuyc_  amino acid (a.a.) range (GLU198)(ASP247)

nSSEs in this Concept: 4

String of secondary struct.elems. (SSEs) defining this concept: HHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLU198)  (SER203) H1
	  (SER203)  (ILE213) H2
	  (GLU220)  (ALA232) H3
	  (GLY241)  (ASP247) E4

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                          
H2      -70.3°   H2                   
H3      120.3°   54.5°   H3            
E4      -53.7° -111.3°  162.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.0°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4wuva_ :   (ASN219)  (ASP276)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Haemophilus influenzae [TaxId: 656912]
 d2ztma_ :   (PRO191)  (ASP254)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Pseudomonas fragi [TaxId: 296]
 d3zn2b_ :   (THR189)  (ALA240)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 358]
 d4iqgd_ :   (ASN202)  (THR245)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Polaromonas sp. [TaxId: 296591]
 d3p19d_ :   (GLU181)  (PRO234)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Vibrio vulnificus [TaxId: 672]
 d1xg5c_ :   (GLN204)  (PRO255)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Putative dehydrogenase ARPG836 (MGC4172) |Human (Homo sapiens) [TaxId: 9606]
 d1e3wd_ :   (THR203)  (ASP254)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Type II 3-hydroxyacyl-CoA dehydrogenase |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4iuya_ :   (GLU198)  (ASP247)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Acinetobacter baumannii [TaxId: 405416]
 d4g81a_ :   (THR199)  (ASP249)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Salmonella enterica [TaxId: 550537]
 d4iuyc_ :   (GLU198)  (ASP247)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Acinetobacter baumannii [TaxId: 405416]
 d4j2ha_ :   (ALA198)  (ASP248)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
 d4iqgb_ :   (ASN202)  (THR245)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Polaromonas sp. [TaxId: 296591]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.2