Tableau information
Concept source: d2oxra_ amino acid (a.a.) range (VAL56)(THR102)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL56) (ARG61) H1
(PRO66) (MET78) H2
(LYS80) (GLU94) H3
(ASP96) (THR102) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 110.7° H2
H3 165.3° -72.5° H3
E4 -35.1° -141.8° 145.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2eknb_ : (PRO38) (PRO80) [view usage] : d.58.21.0 |Ferredoxin-like |Molybdenum cofactor biosynthesis protein C, MoaC |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 70601]
d1yr7a_ : (THR55) (THR102) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |ATP(GTP)-binding protein PAB0955 |Pyrococcus abyssi [TaxId: 29292]
d2uwha_ : (SER72) (PRO142) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
d1yr8a_ : (THR55) (THR102) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |ATP(GTP)-binding protein PAB0955 |Pyrococcus abyssi [TaxId: 29292]
d1zoaa_ : (SER72) (PRO142) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
d2hpgb_ : (TYR106) (SER149) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Thermotoga maritima [TaxId: 2336]
d3ovuc_ : (SER3) (PRO44) [view usage] : a.1.1.2 |Globin-like |Globin-like |Globins |Hemoglobin, alpha-chain |Human (Homo sapiens) [TaxId: 9606]
d1yraa_ : (THR55) (THR102) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |ATP(GTP)-binding protein PAB0955 |Pyrococcus abyssi [TaxId: 29292]
d3npla_ : (SER72) (PRO142) [view usage] : a.104.1.1 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 |Cytochrome P450 bm-3 |Bacillus megaterium [TaxId: 1404]
d3b5ra_ : (ASN771) (ASP819) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Androgen receptor |Human (Homo sapiens) [TaxId: 9606]
d1x3la_ : (SER145) (ILE193) [view usage] : c.118.1.0 |GckA/TtuD-like |GckA/TtuD-like |automated matches |automated matches |Pyrococcus horikoshii [TaxId: 70601]
d2hpga_ : (TYR106) (SER149) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Thermotoga maritima [TaxId: 2336]
d1uysa1 : (VAL1489) (GLU1541) [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |Acetyl-coenzyme A carboxylase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1w2fa_ : (SER351) (GLY397) [view usage] : d.143.1.3 |SAICAR synthase-like |SAICAR synthase-like |Inositol polyphosphate kinase (IPK) |Inositol 1,4,5-trisphosphate 3-kinase A, IP3K A |Human (Homo sapiens) [TaxId: 9606]
d1yrab_ : (THR55) (THR102) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |ATP(GTP)-binding protein PAB0955 |Pyrococcus abyssi [TaxId: 29292]
d3fs1a_ : (ILE196) (LEU236) [view usage] : a.123.1.1 |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |Nuclear receptor ligand-binding domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2oxra_ : (VAL56) (THR102) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |ATP(GTP)-binding protein PAB0955 |Pyrococcus abyssi [TaxId: 29292]
d4fgld_ : (LEU59) (PHE101) [view usage] : c.23.5.3 |Flavodoxin-like |Flavoproteins |Quinone reductase |Quinone reductase type 2 (menadione reductase) |Human (Homo sapiens) [TaxId: 9606]
d1w2ca_ : (SER351) (GLY397) [view usage] : d.143.1.3 |SAICAR synthase-like |SAICAR synthase-like |Inositol polyphosphate kinase (IPK) |Inositol 1,4,5-trisphosphate 3-kinase A, IP3K A |Human (Homo sapiens) [TaxId: 9606]
d2a98a_ : (ALA573) (GLY619) [view usage] : d.143.1.3 |SAICAR synthase-like |SAICAR synthase-like |Inositol polyphosphate kinase (IPK) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1sh8a_ : (PRO39) (VAL80) [view usage] : d.38.1.5 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |PaaI/YdiI-like |Hypothetical protein PA5026 |Pseudomonas aeruginosa [TaxId: 287]
d1yrba_ : (THR55) (THR102) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |ATP(GTP)-binding protein PAB0955 |Pyrococcus abyssi [TaxId: 29292]
d2hpgc_ : (TYR106) (SER149) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Thermotoga maritima [TaxId: 2336]
d1q16b_ : (ARG428) (HIS462) [view usage] : d.58.1.5 |Ferredoxin-like |4Fe-4S ferredoxins |Ferredoxin domains from multidomain proteins |Respiratory nitrate reductase 1 beta chain |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.94, a.104, d.58, c.14, c.23, c.37, a.123, d.143, d.38, a.1, c.118