Tableau information
Concept source: d1eqna_ amino acid (a.a.) range (ARG113)(PRO163)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ARG113) (LEU131) H1
(ALA136) (GLY147) H2
(SER149) (ALA157) H3
(ALA157) (PRO163) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -80.0° H2
H3 163.4° 115.4° H3
E4 79.1° 138.4° 84.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3cl1a_ : (ARG220) (THR255) [view usage] : b.82.3.2 |Double-stranded beta-helix |cAMP-binding domain-like |cAMP-binding domain |automated matches |Rhizobium loti [TaxId: 381]
d1eqnc_ : (LEU116) (PRO163) [view usage] : e.13.1.1 |DNA primase core |DNA primase core |DNA primase DnaG catalytic core |DNA primase DnaG catalytic core |Escherichia coli [TaxId: 562]
d1eqna_ : (ARG113) (PRO163) [view usage] : e.13.1.1 |DNA primase core |DNA primase core |DNA primase DnaG catalytic core |DNA primase DnaG catalytic core |Escherichia coli [TaxId: 562]
d1eqnb_ : (THR115) (PRO163) [view usage] : e.13.1.1 |DNA primase core |DNA primase core |DNA primase DnaG catalytic core |DNA primase DnaG catalytic core |Escherichia coli [TaxId: 562]
d1iw7c_ : (GLU923) (ASP976) [view usage] : e.29.1.1 |beta and beta-prime subunits of DNA dependent RNA-polymerase |beta and beta-prime subunits of DNA dependent RNA-polymerase |RNA-polymerase beta |RNA-polymerase beta |Thermus thermophilus [TaxId: 274]
d2bjoa_ : (VAL112) (LYS136) [view usage] : d.227.1.0 |OsmC-like |OsmC-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d1lmza_ : (THR131) (VAL176) [view usage] : a.96.1.4 |DNA-glycosylase |DNA-glycosylase |3-Methyladenine DNA glycosylase I (Tag) |3-Methyladenine DNA glycosylase I (Tag) |Escherichia coli [TaxId: 562]
d1krsa_ : (SER46) (VAL70) [view usage] : b.40.4.1 |OB-fold |Nucleic acid-binding proteins |Anticodon-binding domain |Lysyl-tRNA synthetase (LysRS) |Escherichia coli, gene lysS [TaxId: 562]
d2olua2 : (ASN300) (ASN334) [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |Penicillin-binding protein 2, PBP2 |Staphylococcus aureus [TaxId: 1280]
d1e31a_ : (PRO7) (THR48) [view usage] : g.52.1.1 |Inhibitor of apoptosis (IAP) repeat |Inhibitor of apoptosis (IAP) repeat |Inhibitor of apoptosis (IAP) repeat |Anti-apoptotic protein survivin |Human (Homo sapiens) [TaxId: 9606]
d1eqnd_ : (THR115) (PRO163) [view usage] : e.13.1.1 |DNA primase core |DNA primase core |DNA primase DnaG catalytic core |DNA primase DnaG catalytic core |Escherichia coli [TaxId: 562]
d1eqne_ : (THR115) (PRO163) [view usage] : e.13.1.1 |DNA primase core |DNA primase core |DNA primase DnaG catalytic core |DNA primase DnaG catalytic core |Escherichia coli [TaxId: 562]
d1vp6a_ : (ARG219) (THR255) [view usage] : b.82.3.2 |Double-stranded beta-helix |cAMP-binding domain-like |cAMP-binding domain |Putative ion channel CnbD |Mesorhizobium loti [TaxId: 381]
d1oqva_ : (SER30) (SER97) [view usage] : d.24.1.2 |Pili subunits |Pili subunits |TcpA-like pilin |Toxin-coregulated pilus subunit TcpA |Vibrio cholerae [TaxId: 666]
d1jqea_ : (ILE226) (ALA292) [view usage] : c.66.1.19 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Histamine methyltransferase |Histamine methyltransferase |Human (Homo sapiens) [TaxId: 9606]
d3cl1b_ : (ARG220) (THR255) [view usage] : b.82.3.2 |Double-stranded beta-helix |cAMP-binding domain-like |cAMP-binding domain |automated matches |Rhizobium loti [TaxId: 381]
d3b39b_ : (ASN109) (PRO163) [view usage] : e.13.1.1 |DNA primase core |DNA primase core |DNA primase DnaG catalytic core |automated matches |Escherichia coli K-12 [TaxId: 83333]
d4mbub_ : (LYS6) (PHE55) [view usage] : d.108.1.0 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |automated matches |automated matches |Staphylococcus aureus [TaxId: 158878]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.3, b.82, c.66, b.40, a.96, d.108, e.13, g.52, d.227, d.24, e.29