Tableau information
Concept source: d4mzya2 amino acid (a.a.) range (THR432)(THR487)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR432) (LEU447) H1
(HIS448) (ARG453) H2
(TYR460) (SER465) E3
(SER465) (THR487) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -113.3° H2
E3 85.7° -116.1° E3
H4 -93.3° 50.5° 69.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4k8uc_ : (ASP411) (SER441) [view usage] : b.8.1.0 |TRAF domain-like |TRAF domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2pt9c_ : (GLU149) (GLU183) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Plasmodium falciparum [TaxId: 36329]
d4mzya2 : (THR432) (THR487) [view usage] : c.1.17.1 |TIM beta/alpha-barrel |Nicotinate/Quinolinate PRTase C-terminal domain-like |NadC C-terminal domain-like |Putative nicotinate phosphoribosyltransferase EF2626 |Enterococcus faecalis [TaxId: 1351]
d1waca_ : (THR631) (VAL659) [view usage] : e.8.1.6 |DNA/RNA polymerases |DNA/RNA polymerases |dsRNA phage RNA-dependent RNA-polymerase |dsRNA phage RNA-dependent RNA-polymerase |Bacteriophage PHI-6 [TaxId: 10879]
d1pwea_ : (PRO214) (LYS263) [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |L-serine dehydratase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2i7cb_ : (GLU111) (GLU145) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Plasmodium falciparum [TaxId: 36329]
d1suia1 : (LEU121) (ILE148) [view usage] : c.66.1.1 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |COMT-like |Caffeoyl-CoA O-methyltransferase |Alfalfa (Medicago sativa) [TaxId: 3879]
d1to6a_ : (LEU238) (LEU269) [view usage] : c.141.1.1 |Glycerate kinase I |Glycerate kinase I |Glycerate kinase I |Glycerate kinase GlxK |Neisseria meningitidis, (serogroup A) [TaxId: 487]
d3sf6a1 : (ALA115) (MET158) [view usage] : e.6.1.0 |Acyl-CoA dehydrogenase NM domain-like |Acyl-CoA dehydrogenase NM domain-like |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d1dqwa_ : (THR5) (LEU51) [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2pd3a_ : (SER220) (MET253) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Enoyl-ACP reductase |Helicobacter pylori [TaxId: 210]
d1bwqa_ : (MET52) (GLY87) [view usage] : c.23.10.3 |Flavodoxin-like |SGNH hydrolase |Acetylhydrolase |Platelet-activating factor acetylhydrolase |Cow (Bos taurus), alpha1 [TaxId: 9913]
d2h30a_ : (THR33) (ASP84) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Peptide methionine sulfoxide reductase MsrA/MsrB, N-terminal domain |Neisseria gonorrhoeae [TaxId: 485]
d1ieza_ : (ALA185) (ARG214) [view usage] : d.115.1.2 |YrdC/RibB |YrdC/RibB |3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB |3,4-dihydroxy-2-butanone 4-phosphate synthase, DHBP synthase, RibB |Escherichia coli [TaxId: 562]
d1tl9a_ : (VAL64) (LEU92) [view usage] : d.3.1.3 |Cysteine proteinases |Cysteine proteinases |Calpain large subunit, catalytic domain (domain II) |Calpain large subunit, catalytic domain (domain II) |Norway rat (Rattus norvegicus), mu-type [TaxId: 10116]
d2htec_ : (GLU112) (GLU146) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Plasmodium falciparum [TaxId: 36329]
d2nvva2 : (SER310) (GLY346) [view usage] : c.124.1.0 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |automated matches |automated matches |Porphyromonas gingivalis [TaxId: 242619]
d2yhxa_ : (PHE400) (ALA451) [view usage] : i.12.1.1 |Proteins of incorrect, partial and unknown sequence |Proteins of incorrect, partial and unknown sequence |Proteins of incorrect, partial and unknown sequence |Hexokinase |Baker's yeast (Saccharomyces cerevisiae), BIII [TaxId: 4932]
d3v8bd_ : (SER227) (ARG260) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d1zq1c2 : (VAL289) (ARG325) [view usage] : d.74.4.1 |DCoH-like |GAD domain-like |GAD domain |Glutamyl-tRNA(gln) amidotransferase subunit E, GatE, insert domain |Pyrococcus abyssi [TaxId: 29292]
d3rieb_ : (THR151) (GLU184) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Plasmodium falciparum [TaxId: 36329]
d3gdra_ : (THR5) (LEU51) [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2f7fa1 : (THR432) (LYS484) [view usage] : c.1.17.1 |TIM beta/alpha-barrel |Nicotinate/Quinolinate PRTase C-terminal domain-like |NadC C-terminal domain-like |Putative nicotinate phosphoribosyltransferase EF2626 |Enterococcus faecalis [TaxId: 1351]
d3gdka_ : (THR5) (LEU51) [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1d6ua2 : (THR100) (ASN143) [view usage] : d.17.2.1 |Cystatin-like |Amine oxidase N-terminal region |Amine oxidase N-terminal region |Copper amine oxidase, domains 1 and 2 |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
e.8, c.1, c.2, c.79, c.66, c.124, c.23, c.47, e.6, d.3, d.17, i.12, d.74, c.141, b.8, d.115