Protein Concepts Dictionary

Tableau information

Concept source:  d1l9ka_  amino acid (a.a.) range (LEU9)(GLY48)

nSSEs in this Concept: 4

String of secondary struct.elems. (SSEs) defining this concept: HHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LEU9)   (LEU20) H1
	   (GLY21)   (SER31) H2
	   (GLN34)   (LEU40) E3
	   (LEU40)   (GLY48) H4

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                          
H2     -130.2°   H2                   
E3      -41.2° -101.0°   E3            
H4      -71.3°  102.6°  -42.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2px5b_ :     (GLY9)   (GLY47)   [view usage] : c.66.1.25 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |mRNA cap methylase |An RNA cap (nucleoside-2'-O-)-methyltransferase domain of RNA polymerase NS5 |Murray valley encephalitis virus (strain mve-1-51) [TaxId: 301478]
 d2wa1b_ :     (THR8)   (GLY48)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Modoc virus [TaxId: 64300]
 d3evga_ :     (THR8)   (GLY48)   [view usage] : c.66.1.25 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |mRNA cap methylase |automated matches |Dengue virus 2 16681-pdk53 [TaxId: 31635]
 d3p8za_ :     (THR8)   (GLY48)   [view usage] : c.66.1.25 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |mRNA cap methylase |automated matches |Dengue virus 3 [TaxId: 11069]
 d2wa2b_ :     (THR8)   (GLY48)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Modoc virus [TaxId: 64300]
 d1z6aa3 :   (SER615)  (ASP659)   [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |automated matches |Sulfolobus solfataricus [TaxId: 273057]
 d1z63a1 :   (ALA624)  (ASP659)   [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |Helicase of the SNF2/Rad54 hamily |Sulfolobus solfataricus [TaxId: 2287]
 d3elwa_ :     (THR7)   (GLY47)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Wesselsbron virus [TaxId: 164416]
 d1r8wa_ :   (PRO520)  (LYS564)   [view usage] : c.7.1.1 |PFL-like glycyl radical enzymes |PFL-like glycyl radical enzymes |PFL-like |Glycerol dehydratase DhaB1 |Clostridium butyricum [TaxId: 1492]
 d3emda_ :     (LEU8)   (GLY47)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Wesselsbron virus [TaxId: 164416]
 d3emba_ :     (LEU8)   (GLY47)   [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Wesselsbron virus [TaxId: 164416]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.66,    c.37,     c.7