Tableau information
Concept source: d4adbc_ amino acid (a.a.) range (PRO58)(ARG123)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO58) (PHE71) H1
(PRO82) (THR94) H2
(ASP97) (ASN103) E3
(GLY105) (ARG123) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -137.6° H2
E3 -85.0° 127.4° E3
H4 69.1° -68.6° 133.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1u74c_ : (LEU245) (GLY293) [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Cytochrome c peroxidase, CCP |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2xsob_ : (LEU21) (SER74) [view usage] : d.17.4.4 |Cystatin-like |NTF2-like |Ring hydroxylating beta subunit |automated matches |Burkholderia xenovorans [TaxId: 266265]
d4lu1a_ : (SER131) (GLY188) [view usage] : c.51.4.0 |Anticodon-binding domain-like |ITPase-like |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1wqlb1 : (SER18) (VAL72) [view usage] : d.17.4.4 |Cystatin-like |NTF2-like |Ring hydroxylating beta subunit |Small subunit of cumene dioxygenase CumA2 |Pseudomonas fluorescens [TaxId: 294]
d2ioha_ : (THR214) (GLU260) [view usage] : c.108.1.3 |HAD-like |HAD-like |Phosphonoacetaldehyde hydrolase-like |automated matches |Bacillus cereus [TaxId: 1396]
d2bhna2 : (PRO102) (THR148) [view usage] : c.52.1.20 |Restriction endonuclease-like |Restriction endonuclease-like |XPF/Rad1/Mus81 nuclease |XPF endonuclease |Aeropyrum pernix [TaxId: 56636]
d1ulid_ : (ASP19) (SER73) [view usage] : d.17.4.4 |Cystatin-like |NTF2-like |Ring hydroxylating beta subunit |Biphenyl dioxygenase small subunit BphA2 |Rhodococcus sp. RHA1 [TaxId: 101510]
d1rqla_ : (THR214) (GLU260) [view usage] : c.108.1.3 |HAD-like |HAD-like |Phosphonoacetaldehyde hydrolase-like |Phosphonoacetaldehyde hydrolase |Bacillus cereus [TaxId: 1396]
d2bgwb2 : (PRO102) (THR148) [view usage] : c.52.1.20 |Restriction endonuclease-like |Restriction endonuclease-like |XPF/Rad1/Mus81 nuclease |XPF endonuclease |Aeropyrum pernix [TaxId: 56636]
d1fjda_ : (ARG63) (LEU101) [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |Parvulin |Human (Homo sapiens), hpar14 [TaxId: 9606]
d2iofa_ : (THR214) (GLU260) [view usage] : c.108.1.3 |HAD-like |HAD-like |Phosphonoacetaldehyde hydrolase-like |automated matches |Bacillus cereus [TaxId: 1396]
d1uara1 : (HIS5) (GLY39) [view usage] : c.46.1.2 |Rhodanese/Cell cycle control phosphatase |Rhodanese/Cell cycle control phosphatase |Multidomain sulfurtransferase (rhodanese) |Sulfurtransferase |Thermus thermophilus [TaxId: 274]
d1eyrb_ : (PRO72) (SER120) [view usage] : c.68.1.13 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |Cytidylytransferase |CMP acylneuraminate synthetase |Neisseria meningitidis [TaxId: 487]
d1qwjb_ : (LYS115) (GLU162) [view usage] : c.68.1.13 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |Cytidylytransferase |CMP acylneuraminate synthetase |Mouse (Mus musculus) [TaxId: 10090]
d1xvua1 : (TYR288) (ASN331) [view usage] : c.123.1.1 |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |CoA-transferase family III (CaiB/BaiF) |Crotonobetainyl-CoA:carnitine CoA-transferase, CaiB |Escherichia coli [TaxId: 562]
d2c44a1 : (THR60) (TYR109) [view usage] : c.67.1.2 |PLP-dependent transferase-like |PLP-dependent transferases |Beta-eliminating lyases |Tryptophan indol-lyase (tryptophanase) |Escherichia coli [TaxId: 562]
d4tmza1 : (ARG665) (VAL710) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Chaetomium thermophilum [TaxId: 209285]
d1ibja_ : (VAL87) (HIS166) [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |Cystathionine beta-lyase, CBL |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d2pb0b_ : (PRO61) (SER128) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Salmonella typhimurium [TaxId: 99287]
d3cogd_ : (PHE18) (HIS99) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1rdfa_ : (GLU216) (LYS261) [view usage] : c.108.1.3 |HAD-like |HAD-like |Phosphonoacetaldehyde hydrolase-like |Phosphonoacetaldehyde hydrolase |Bacillus cereus [TaxId: 1396]
d2fn6a1 : (GLU233) (GLY309) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |Spore coat polysaccharide biosynthesis protein C |Helicobacter pylori [TaxId: 210]
d3qyta1 : (PRO140) (PRO175) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2qtma_ : (LEU74) (LYS115) [view usage] : c.26.1.3 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Adenylyltransferase |Nicotinamide mononucleotide (NMN) adenylyltransferase |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d1ojja_ : (ALA366) (TYR398) [view usage] : b.29.1.10 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolase family 7 catalytic core |Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) |Humicola insolens, Cel7b [TaxId: 34413]
d1d4na_ : (PRO140) (PRO175) [view usage] : c.94.1.2 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Transferrin |Transferrin |Human (Homo sapiens) [TaxId: 9606]
d2c44c_ : (THR60) (TYR109) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Escherichia coli [TaxId: 562]
d2h29a_ : (ASP74) (GLN112) [view usage] : c.26.1.3 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |Adenylyltransferase |Nicotinamide mononucleotide (NMN) adenylyltransferase |Staphylococcus aureus [TaxId: 1280]
d1dtya_ : (HIS61) (LEU124) [view usage] : c.67.1.4 |PLP-dependent transferase-like |PLP-dependent transferases |GABA-aminotransferase-like |Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA |Escherichia coli [TaxId: 562]
d1ulib_ : (ASP19) (SER73) [view usage] : d.17.4.4 |Cystatin-like |NTF2-like |Ring hydroxylating beta subunit |Biphenyl dioxygenase small subunit BphA2 |Rhodococcus sp. RHA1 [TaxId: 101510]
d2a39a_ : (ALA366) (TYR398) [view usage] : b.29.1.10 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolase family 7 catalytic core |Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) |Humicola insolens, Cel7b [TaxId: 34413]
d1eyra_ : (PRO72) (SER120) [view usage] : c.68.1.13 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |Cytidylytransferase |CMP acylneuraminate synthetase |Neisseria meningitidis [TaxId: 487]
d1u74a_ : (LEU245) (GLY293) [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Cytochrome c peroxidase, CCP |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3gzxb_ : (SER18) (VAL72) [view usage] : d.17.4.4 |Cystatin-like |NTF2-like |Ring hydroxylating beta subunit |automated matches |Comamonas testosteroni [TaxId: 285]
d1feza_ : (GLU215) (ILE259) [view usage] : c.108.1.3 |HAD-like |HAD-like |Phosphonoacetaldehyde hydrolase-like |Phosphonoacetaldehyde hydrolase |Bacillus cereus [TaxId: 1396]
d1swva_ : (THR214) (GLU260) [view usage] : c.108.1.3 |HAD-like |HAD-like |Phosphonoacetaldehyde hydrolase-like |Phosphonoacetaldehyde hydrolase |Bacillus cereus [TaxId: 1396]
d3h1hn1 : (THR170) (HIS215) [view usage] : d.185.1.0 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d2oxra_ : (SER197) (THR243) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |ATP(GTP)-binding protein PAB0955 |Pyrococcus abyssi [TaxId: 29292]
d3grda_ : (ALA4) (GLY43) [view usage] : d.17.4.0 |Cystatin-like |NTF2-like |automated matches |automated matches |Bacillus cereus [TaxId: 222523]
d3irua_ : (ARG221) (GLY272) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Oleispira antarctica [TaxId: 188908]
d1bhga2 : (GLN62) (SER87) [view usage] : b.18.1.5 |Galactose-binding domain-like |Galactose-binding domain-like |beta-Galactosidase/glucuronidase, N-terminal domain |beta-Glucuronidase |Human (Homo sapiens) [TaxId: 9606]
d3b9nb_ : (ASP319) (GLY371) [view usage] : c.1.16.0 |TIM beta/alpha-barrel |Bacterial luciferase-like |automated matches |automated matches |Geobacillus thermodenitrificans [TaxId: 33940]
d3grdb_ : (ALA4) (GLY43) [view usage] : d.17.4.0 |Cystatin-like |NTF2-like |automated matches |automated matches |Bacillus cereus [TaxId: 222523]
d1yk3e_ : (LEU136) (ASN173) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Hypothetical protein Rv1347c/MT1389 |Mycobacterium tuberculosis [TaxId: 1773]
d1l1ya_ : (ASN353) (GLN438) [view usage] : a.102.1.2 |alpha/alpha toroid |Six-hairpin glycosidases |Cellulases catalytic domain |Processive endocellulase CelF (Cel48F) |Clostridium thermocellum [TaxId: 1515]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.123, c.67, c.94, c.68, c.108, b.29, c.26, a.102, a.93, c.37, d.185, b.18, d.108, d.17, c.51, c.52, c.46, d.26