Tableau information
Concept source: d2uyva_ amino acid (a.a.) range (PHE9)(HIS46)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PHE9) (LYS15) H1
(ALA16) (GLY24) H2
(GLY30) (ARG36) E3
(ASP38) (HIS46) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 3.4° H2
E3 156.0° 157.8° E3
H4 -107.7° -104.7° -93.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1gt7a_ : (PHE9) (ALA43) [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |L-rhamnulose-1-phosphate aldolase |Escherichia coli [TaxId: 562]
d2oeja1 : (LEU88) (ARG118) [view usage] : d.58.9.0 |Ferredoxin-like |RuBisCO, large subunit, small (N-terminal) domain |automated matches |automated matches |Geobacillus kaustophilus [TaxId: 1462]
d4ff7a_ : (GLY214) (PRO238) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2v9ga_ : (PHE9) (ALA43) [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |automated matches |Escherichia coli [TaxId: 562]
d1vkna2 : (CYS145) (GLY180) [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |N-acetyl-gamma-glutamyl-phosphate reductase ArgC |Thermotoga maritima [TaxId: 2336]
d2uyua_ : (PHE9) (HIS46) [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |L-rhamnulose-1-phosphate aldolase |Escherichia coli [TaxId: 562]
d1idda_ : (ASP35) (VAL77) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |Isocitrate dehydrogenase, ICDH |Escherichia coli [TaxId: 562]
d1grpa_ : (ASP35) (VAL77) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |Isocitrate dehydrogenase, ICDH |Escherichia coli [TaxId: 562]
d1b73a1 : (CYS70) (LYS103) [view usage] : c.78.2.1 |ATC-like |Aspartate/glutamate racemase |Aspartate/glutamate racemase |Glutamate racemase |Aquifex pyrophilus [TaxId: 2714]
d2i7na2 : (SER510) (ASN552) [view usage] : c.55.1.14 |Ribonuclease H-like motif |Actin-like ATPase domain |Fumble-like |Pantothenate kinase 1, PANK1 |Human (Homo sapiens) [TaxId: 9606]
d4l76b1 : (ARG213) (SER242) [view usage] : c.2.1.9 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Potassium channel NAD-binding domain |automated matches |Methanothermobacter thermautotrophicus [TaxId: 187420]
d2f6ua1 : (GLY1089) (THR1137) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |(S)-3-O-geranylgeranylglyceryl phosphate synthase |Archaeoglobus fulgidus [TaxId: 2234]
d1ai2a_ : (ASP35) (VAL77) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |Isocitrate dehydrogenase, ICDH |Escherichia coli [TaxId: 562]
d6icda_ : (ASP35) (GLY79) [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |Isocitrate dehydrogenase, ICDH |Escherichia coli [TaxId: 562]
d1fa0a4 : (THR41) (GLY93) [view usage] : d.218.1.3 |Nucleotidyltransferase |Nucleotidyltransferase |Poly(A) polymerase, PAP, N-terminal domain |Poly(A) polymerase, PAP, N-terminal domain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d2v9ea_ : (PHE9) (HIS46) [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |automated matches |Escherichia coli [TaxId: 562]
d1ojra_ : (PHE9) (HIS46) [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |L-rhamnulose-1-phosphate aldolase |Escherichia coli [TaxId: 562]
d2v9ma_ : (PHE9) (HIS46) [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |automated matches |Escherichia coli [TaxId: 562]
d3p31d_ : (GLY166) (ARG195) [view usage] : d.299.1.1 |Ns1 effector domain-like |Ns1 effector domain-like |Ns1 effector domain-like |automated matches |Influenza A virus [TaxId: 680789]
d3rh5a3 : (PRO151) (GLY184) [view usage] : d.218.1.2 |Nucleotidyltransferase |Nucleotidyltransferase |DNA polymerase beta-like |DNA polymerase beta, catalytic (31 kD) fragment |Human (Homo sapiens) [TaxId: 9606]
d3mk6c2 : (SER285) (ASN327) [view usage] : c.55.1.14 |Ribonuclease H-like motif |Actin-like ATPase domain |Fumble-like |Pantothenate kinase 3, PANK3 |Human (Homo sapiens) [TaxId: 9606]
d1w5sa2 : (ASN99) (SER153) [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |CDC6-like protein APE0152, N-terminal domain |Aeropyrum pernix [TaxId: 56636]
d1bpxa4 : (PRO151) (GLY184) [view usage] : d.218.1.2 |Nucleotidyltransferase |Nucleotidyltransferase |DNA polymerase beta-like |DNA polymerase beta, catalytic (31 kD) fragment |Human (Homo sapiens) [TaxId: 9606]
d3c5fa3 : (ARG389) (GLY421) [view usage] : d.218.1.2 |Nucleotidyltransferase |Nucleotidyltransferase |DNA polymerase beta-like |DNA polymerase lambda |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.2, d.58, c.77, c.74, c.37, c.55, d.81, c.78, d.299, d.218