Tableau information
Concept source: d1go4b_ amino acid (a.a.) range (THR12)(ASP58)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR12) (GLY36) H1
(PRO39) (THR44) H2
(THR44) (LYS48) E3
(LEU53) (ASP58) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 -150.1° H2
E3 -140.9° 52.7° E3
E4 75.9° 104.2° 140.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2v64h_ : (SER16) (ASP58) [view usage] : d.135.1.1 |The spindle assembly checkpoint protein mad2 |The spindle assembly checkpoint protein mad2 |The spindle assembly checkpoint protein mad2 |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2i5ea1 : (GLU171) (LEU208) [view usage] : c.68.1.21 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |MM2497-like |Hypothetical protein MM2497 |Methanosarcina mazei [TaxId: 2209]
d3qpfa_ : (GLU320) (SER349) [view usage] : a.102.1.0 |alpha/alpha toroid |Six-hairpin glycosidases |automated matches |automated matches |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
d2v64a_ : (THR12) (LEU59) [view usage] : d.135.1.1 |The spindle assembly checkpoint protein mad2 |The spindle assembly checkpoint protein mad2 |The spindle assembly checkpoint protein mad2 |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2nvpa1 : (LEU228) (GLU288) [view usage] : a.102.1.8 |alpha/alpha toroid |Six-hairpin glycosidases |CPF0428-like |Hypothetical protein CPF0428 |Clostridium perfringens [TaxId: 1502]
d1obra_ : (TYR12) (SER50) [view usage] : c.56.5.2 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Carboxypeptidase T |Carboxypeptidase T |Thermoactinomyces vulgaris [TaxId: 2026]
d1gsza2 : (PRO263) (SER307) [view usage] : a.102.4.2 |alpha/alpha toroid |Terpenoid cyclases/Protein prenyltransferases |Terpene synthases |Squalene-hopene cyclase |Alicyclobacillus acidocaldarius [TaxId: 405212]
d4espa_ : (GLU45) (GLN76) [view usage] : d.110.1.1 |Profilin-like |Profilin (actin-binding protein) |Profilin (actin-binding protein) |automated matches |Peanut (Arachis hypogaea) [TaxId: 3818]
d2vfxe_ : (THR12) (LEU59) [view usage] : d.135.1.1 |The spindle assembly checkpoint protein mad2 |The spindle assembly checkpoint protein mad2 |The spindle assembly checkpoint protein mad2 |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1a0ka_ : (LYS43) (GLN76) [view usage] : d.110.1.1 |Profilin-like |Profilin (actin-binding protein) |Profilin (actin-binding protein) |Profilin (actin-binding protein) |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d2i5eb_ : (GLU171) (LEU208) [view usage] : c.68.1.21 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |MM2497-like |Hypothetical protein MM2497 |Methanosarcina mazei [TaxId: 2209]
d3qt9a_ : (ILE229) (GLU288) [view usage] : a.102.1.8 |alpha/alpha toroid |Six-hairpin glycosidases |CPF0428-like |Hypothetical protein CPF0428 |Clostridium perfringens [TaxId: 1502]
d1vubb_ : (SER38) (THR66) [view usage] : b.34.6.1 |SH3-like barrel |Cell growth inhibitor/plasmid maintenance toxic component |CcdB |CcdB |Escherichia coli [TaxId: 562]
d1go4b_ : (THR12) (ASP58) [view usage] : d.135.1.1 |The spindle assembly checkpoint protein mad2 |The spindle assembly checkpoint protein mad2 |The spindle assembly checkpoint protein mad2 |The spindle assembly checkpoint protein mad2 |Human (Homo sapiens) [TaxId: 9606]
d1zvda_ : (GLU665) (GLN702) [view usage] : d.148.1.0 |Hect, E3 ligase catalytic domain |Hect, E3 ligase catalytic domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3tbja_ : (LEU34) (ASN80) [view usage] : d.124.1.0 |Ribonuclease Rh-like |Ribonuclease Rh-like |automated matches |automated matches |Aspergillus niger [TaxId: 5061]
d1nj8a3 : (PRO63) (LEU98) [view usage] : d.104.1.1 |Class II aaRS and biotin synthetases |Class II aaRS and biotin synthetases |Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain |Prolyl-tRNA synthetase (ProRS) |Methanocaldococcus jannaschii [TaxId: 2190]
d1ayea1 : (THR14) (SER53) [view usage] : c.56.5.1 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Pancreatic carboxypeptidases |Carboxypeptidase A |Human (Homo sapiens) [TaxId: 9606]
d3d3za_ : (LEU11) (ASN57) [view usage] : d.124.1.0 |Ribonuclease Rh-like |Ribonuclease Rh-like |automated matches |automated matches |Aspergillus niger [TaxId: 5061]
d1pcaa2 : (THR14) (SER53) [view usage] : c.56.5.1 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Pancreatic carboxypeptidases |Carboxypeptidase A |Pig (Sus scrofa) [TaxId: 9823]
d1ej6d_ : (THR186) (LEU253) [view usage] : i.7.1.1 |Reovirus components |Reovirus components |Reovirus components |Reovirus core |Reovirus sp. [TaxId: 10891]
d1qxaa_ : (THR136) (VAL169) [view usage] : b.100.1.1 |Sortase |Sortase |Sortase |Sortase B |Staphylococcus aureus [TaxId: 1280]
d1qxaa_ : (LYS178) (SER244) [view usage] : b.100.1.1 |Sortase |Sortase |Sortase |Sortase B |Staphylococcus aureus [TaxId: 1280]
d1ng5a_ : (ASN151) (SER215) [view usage] : b.100.1.1 |Sortase |Sortase |Sortase |Sortase B |Staphylococcus aureus [TaxId: 1280]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.68, c.56, a.102, d.104, d.110, d.124, b.34, d.148, b.100, i.7, d.135