Tableau information
Concept source: d1dixa_ amino acid (a.a.) range (ASP123)(CYS177)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP123) (ASP132) H1
(ASP141) (GLY154) H2
(TRP158) (VAL163) E3
(TYR172) (CYS177) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 117.6° H2
E3 -82.0° 146.1° E3
E4 111.7° -36.7° 162.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1zb6a1 : (ALA144) (SER177) [view usage] : d.313.1.1 |Antiparallel beta/alpha barrel (PT-barrel) |Prenyltransferase-like |Prenyltransferase-like |Aromatic prenyltransferase |Streptomyces sp. CL190 [TaxId: 93372]
d2p5xa_ : (ASP47) (LYS100) [view usage] : c.51.4.0 |Anticodon-binding domain-like |ITPase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2nnwb_ : (LYS179) (VAL224) [view usage] : c.66.1.3 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Fibrillarin homologue |Fibrillarin homologue |Pyrococcus furiosus [TaxId: 2261]
d1fwka1 : (LYS119) (ASP167) [view usage] : d.14.1.5 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |GHMP Kinase, N-terminal domain |Homoserine kinase |Methanococcus jannaschii [TaxId: 2190]
d2gmoa1 : (GLY685) (ARG737) [view usage] : d.361.1.1 |PB2 C-terminal domain-like |PB2 C-terminal domain-like |PB2 C-terminal domain-like |Polymerase basic protein 2, BP2 |Influenza A virus [TaxId: 11320]
d2ym9c_ : (VAL213) (VAL256) [view usage] : a.250.1.0 |IpaD-like |IpaD-like |automated matches |automated matches |Salmonella enterica [TaxId: 216597]
d1fbna_ : (LYS179) (ILE226) [view usage] : c.66.1.3 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Fibrillarin homologue |Fibrillarin homologue |Methanococcus jannaschii [TaxId: 2190]
d1vcza_ : (GLY104) (CYS175) [view usage] : d.124.1.1 |Ribonuclease Rh-like |Ribonuclease Rh-like |Ribonuclease Rh-like |automated matches |Nicotiana glutinosa [TaxId: 35889]
d1hn6a_ : (PRO442) (LYS508) [view usage] : g.61.1.1 |Apical membrane antigen 1 |Apical membrane antigen 1 |Apical membrane antigen 1 |Apical membrane antigen 1 |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
d1prya_ : (LYS179) (PRO227) [view usage] : c.66.1.3 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Fibrillarin homologue |Fibrillarin homologue |Pyrococcus furiosus [TaxId: 2261]
d1e6vb2 : (ASP50) (LEU117) [view usage] : d.58.31.2 |Ferredoxin-like |Methyl-coenzyme M reductase subunits |Methyl-coenzyme M reductase alpha and beta chain N-terminal domain |Beta chain |Methanopyrus kandleri [TaxId: 2320]
d1el1a_ : (CYS6) (ILE56) [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Dog (Canis familiaris), milk [TaxId: 9615]
d1d6qa_ : (GLU4) (ILE56) [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Human (Homo sapiens) [TaxId: 9606]
d1kt0a3 : (THR189) (LYS248) [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |FKBP51, N-terminal domains |Human (Homo sapiens) [TaxId: 9606]
d1hhla_ : (GLY4) (VAL55) [view usage] : d.2.1.2 |Lysozyme-like |Lysozyme-like |C-type lysozyme |Lysozyme |Guinea fowl (Numida meleagris) [TaxId: 8996]
d2k7sa_ : (ASN44) (LYS81) [view usage] : d.110.3.0 |Profilin-like |PYP-like sensor domain (PAS domain) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2ym0b_ : (VAL213) (VAL256) [view usage] : a.250.1.0 |IpaD-like |IpaD-like |automated matches |automated matches |Salmonella enterica [TaxId: 216597]
d2fska1 : (VAL206) (PRO248) [view usage] : c.55.1.12 |Ribonuclease H-like motif |Actin-like ATPase domain |Ta0583-like |Hypothetical protein Ta0583 |Thermoplasma acidophilum [TaxId: 2303]
d2bdwb_ : (LEU97) (GLY158) [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d2e21b2 : (LEU264) (GLU308) [view usage] : d.229.1.1 |MesJ substrate recognition domain-like |MesJ substrate recognition domain-like |MesJ substrate recognition domain-like |TilS-like protein Aq_1887 |Aquifex aeolicus [TaxId: 63363]
d1dixa_ : (ASP123) (CYS177) [view usage] : d.124.1.1 |Ribonuclease Rh-like |Ribonuclease Rh-like |Ribonuclease Rh-like |RNase LE |Tomato (Lycopersicon esculentum) [TaxId: 4081]
d4lava2 : (GLU191) (SER251) [view usage] : d.26.1.1 |FKBP-like |FKBP-like |FKBP immunophilin/proline isomerase |FKBP52, N-terminal domains |Human (Homo sapiens) [TaxId: 9606]
d2ym0a_ : (VAL213) (VAL256) [view usage] : a.250.1.0 |IpaD-like |IpaD-like |automated matches |automated matches |Salmonella enterica [TaxId: 216597]
d1vd1a_ : (LEU121) (CYS175) [view usage] : d.124.1.1 |Ribonuclease Rh-like |Ribonuclease Rh-like |Ribonuclease Rh-like |automated matches |Nicotiana glutinosa [TaxId: 35889]
d1kkha1 : (LYS137) (LYS179) [view usage] : d.14.1.5 |Ribosomal protein S5 domain 2-like |Ribosomal protein S5 domain 2-like |GHMP Kinase, N-terminal domain |Mevalonate kinase |Methanococcus jannaschii [TaxId: 2190]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.58, c.66, d.144, c.55, d.2, d.14, d.110, d.124, c.51, d.26, d.313, d.229, d.361, a.250, g.61