Tableau information
Concept source: d1jhfa1 amino acid (a.a.) range (THR27)(GLN70)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HHEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR27) (GLY36) H1
(PRO40) (GLY54) H2
(VAL55) (SER60) E3
(GLY65) (GLN70) E4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 105.2° H2
E3 -129.3° -123.8° E3
E4 72.1° 33.5° 157.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3bwya_ : (ASN170) (GLY214) [view usage] : c.66.1.1 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |COMT-like |Catechol O-methyltransferase, COMT |Human (Homo sapiens) [TaxId: 9606]
d2gg6a_ : (LEU347) (ASP386) [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase |Agrobacterium sp. [TaxId: 268951]
d1y0ub_ : (SER43) (THR81) [view usage] : a.4.5.5 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ArsR-like transcriptional regulators |Putative arsenical resistance operon repressor AF0168 |Archaeoglobus fulgidus [TaxId: 2234]
d1eqnc_ : (ASP166) (ASP198) [view usage] : e.13.1.1 |DNA primase core |DNA primase core |DNA primase DnaG catalytic core |DNA primase DnaG catalytic core |Escherichia coli [TaxId: 562]
d1eqna_ : (ASP166) (PHE200) [view usage] : e.13.1.1 |DNA primase core |DNA primase core |DNA primase DnaG catalytic core |DNA primase DnaG catalytic core |Escherichia coli [TaxId: 562]
d4fioc_ : (SER3) (GLY39) [view usage] : d.147.1.0 |Methenyltetrahydromethanopterin cyclohydrolase |Methenyltetrahydromethanopterin cyclohydrolase |automated matches |automated matches |Methanobrevibacter ruminantium [TaxId: 634498]
d4h05a_ : (LEU46) (GLU87) [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Streptomyces rimosus [TaxId: 1927]
d4b8nb_ : (ASN12) (LEU41) [view usage] : d.120.1.0 |Cytochrome b5-like heme/steroid binding domain |Cytochrome b5-like heme/steroid binding domain |automated matches |automated matches |Ostreococcus tauri virus 2 [TaxId: 696472]
d1nkta1 : (ALA231) (HIS263) [view usage] : a.162.1.1 |Pre-protein crosslinking domain of SecA |Pre-protein crosslinking domain of SecA |Pre-protein crosslinking domain of SecA |Pre-protein crosslinking domain of SecA |Mycobacterium tuberculosis [TaxId: 1773]
d1af7a2 : (ARG169) (VAL198) [view usage] : c.66.1.8 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Chemotaxis receptor methyltransferase CheR, C-terminal domain |Chemotaxis receptor methyltransferase CheR, C-terminal domain |Salmonella typhimurium [TaxId: 90371]
d4h05b_ : (ALA45) (THR86) [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Streptomyces rimosus [TaxId: 1927]
d1pm6a_ : (THR4) (HIS44) [view usage] : a.6.1.7 |Putative DNA-binding domain |Putative DNA-binding domain |Excisionase-like |Excisionase Xis |Bacteriophage lambda [TaxId: 10710]
d4fiob_ : (SER3) (GLY39) [view usage] : d.147.1.0 |Methenyltetrahydromethanopterin cyclohydrolase |Methenyltetrahydromethanopterin cyclohydrolase |automated matches |automated matches |Methanobrevibacter ruminantium [TaxId: 634498]
d3tqsa_ : (LYS135) (PRO189) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Coxiella burnetii [TaxId: 777]
d1rnia_ : (LYS115) (LEU149) [view usage] : d.264.1.2 |Prim-pol domain |Prim-pol domain |Bifunctional DNA primase/polymerase N-terminal domain |Bifunctional DNA primase/polymerase N-terminal domain |Sulfolobus islandicus [TaxId: 43080]
d2cl5a_ : (ASN170) (GLY214) [view usage] : c.66.1.1 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |COMT-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d3r9xb_ : (LYS130) (LYS181) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Aquifex aeolicus [TaxId: 63363]
d1h1da_ : (ASN170) (GLY214) [view usage] : c.66.1.1 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |COMT-like |Catechol O-methyltransferase, COMT |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1ro0a_ : (LYS115) (VAL148) [view usage] : d.264.1.2 |Prim-pol domain |Prim-pol domain |Bifunctional DNA primase/polymerase N-terminal domain |Bifunctional DNA primase/polymerase N-terminal domain |Sulfolobus islandicus [TaxId: 43080]
d1d4ua1 : (THR43) (TYR84) [view usage] : a.6.1.2 |Putative DNA-binding domain |Putative DNA-binding domain |DNA repair factor XPA DNA- and RPA-binding domain, C-terminal subdomain |DNA repair factor XPA DNA- and RPA-binding domain, C-terminal subdomain |Human (Homo sapiens) [TaxId: 9606]
d3prla_ : (ASP336) (ASP375) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Bacillus halodurans [TaxId: 86665]
d2hqra2 : (SER164) (TYR216) [view usage] : a.4.6.0 |DNA/RNA-binding 3-helical bundle |C-terminal effector domain of the bipartite response regulators |automated matches |automated matches |Helicobacter pylori [TaxId: 85963]
d4fioa_ : (SER3) (ASP37) [view usage] : d.147.1.0 |Methenyltetrahydromethanopterin cyclohydrolase |Methenyltetrahydromethanopterin cyclohydrolase |automated matches |automated matches |Methanobrevibacter ruminantium [TaxId: 634498]
d1uf2c2 : (GLU152) (ASN199) [view usage] : b.19.1.1 |Viral protein domain |Viral protein domain |Top domain of virus capsid protein |RDV p8, central (top) domain |Rice dwarf virus [TaxId: 10991]
d2ibsa1 : (ALA166) (SER211) [view usage] : c.66.1.27 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |DNA methylase TaqI, N-terminal domain |DNA methylase TaqI, N-terminal domain |Thermus aquaticus [TaxId: 271]
d2bswa1 : (ARG111) (THR146) [view usage] : d.108.1.1 |Acyl-CoA N-acyltransferases (Nat) |Acyl-CoA N-acyltransferases (Nat) |N-acetyl transferase, NAT |Probable acetyltransferase YitI |Bacillus licheniformis [TaxId: 1402]
d2jg3a1 : (ALA166) (SER211) [view usage] : c.66.1.27 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |DNA methylase TaqI, N-terminal domain |automated matches |Thermus aquaticus [TaxId: 271]
d1y0ua_ : (SER43) (THR81) [view usage] : a.4.5.5 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ArsR-like transcriptional regulators |Putative arsenical resistance operon repressor AF0168 |Archaeoglobus fulgidus [TaxId: 2234]
d4b8nc_ : (ASN12) (THR42) [view usage] : d.120.1.0 |Cytochrome b5-like heme/steroid binding domain |Cytochrome b5-like heme/steroid binding domain |automated matches |automated matches |Ostreococcus tauri virus 2 [TaxId: 696472]
d1wfxa_ : (ARG31) (ALA73) [view usage] : d.166.1.5 |ADP-ribosylation |ADP-ribosylation |Tpt1/KptA |Probable RNA 2'-phosphotransferase KptA |Aeropyrum pernix [TaxId: 56636]
d1eqnd_ : (ASP166) (PHE200) [view usage] : e.13.1.1 |DNA primase core |DNA primase core |DNA primase DnaG catalytic core |DNA primase DnaG catalytic core |Escherichia coli [TaxId: 562]
d3ftfa_ : (LYS130) (LYS181) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Aquifex aeolicus [TaxId: 224324]
d1qlma_ : (SER3) (ASP37) [view usage] : d.147.1.1 |Methenyltetrahydromethanopterin cyclohydrolase |Methenyltetrahydromethanopterin cyclohydrolase |Methenyltetrahydromethanopterin cyclohydrolase |Methenyltetrahydromethanopterin cyclohydrolase |Methanopyrus kandleri [TaxId: 2320]
d1uwva2 : (PRO391) (ARG431) [view usage] : c.66.1.40 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |(Uracil-5-)-methyltransferase |rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain |Escherichia coli [TaxId: 562]
d1g38a1 : (PRO165) (SER211) [view usage] : c.66.1.27 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |DNA methylase TaqI, N-terminal domain |DNA methylase TaqI, N-terminal domain |Thermus aquaticus [TaxId: 271]
d3cbga_ : (ASN170) (LEU218) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Synechocystis sp. [TaxId: 1148]
d1v3fa_ : (LEU39) (PHE102) [view usage] : a.4.5.31 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |DEP domain |Pleckstrin 2 |Mouse (Mus musculus) [TaxId: 10090]
d2ggda_ : (LEU347) (ASP386) [view usage] : d.68.2.2 |IF3-like |EPT/RTPC-like |Enolpyruvate transferase, EPT |5-enol-pyruvyl shikimate-3-phosphate (EPSP) synthase |Agrobacterium sp. [TaxId: 268951]
d3b39b_ : (ASP166) (ASP198) [view usage] : e.13.1.1 |DNA primase core |DNA primase core |DNA primase DnaG catalytic core |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2hqna_ : (SER164) (CYS215) [view usage] : a.4.6.0 |DNA/RNA-binding 3-helical bundle |C-terminal effector domain of the bipartite response regulators |automated matches |automated matches |Helicobacter pylori [TaxId: 85963]
d4gvra_ : (SER3) (GLY39) [view usage] : d.147.1.0 |Methenyltetrahydromethanopterin cyclohydrolase |Methenyltetrahydromethanopterin cyclohydrolase |automated matches |automated matches |Archaeoglobus fulgidus [TaxId: 224325]
d1uwya2 : (GLN8) (GLY46) [view usage] : c.56.5.1 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |Pancreatic carboxypeptidases |Carboxypeptidase M, catalytic domain |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.19, d.68, c.82, c.56, c.66, d.144, d.166, d.108, e.13, a.4, d.120, d.264, a.6, a.162, d.147