Tableau information
Concept source: d1uaxa_ amino acid (a.a.) range (THR45)(LEU95)
nSSEs in this Concept: 4
String of secondary struct.elems. (SSEs) defining this concept: HEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR45) (LEU60) H1
(ASP62) (THR69) E2
(PRO70) (ARG76) H3
(MET80) (LEU95) H4
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -127.4° E2
H3 83.8° -66.2° H3
H4 -44.3° 141.6° 128.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4gria1 : (ARG87) (LEU137) [view usage] : c.26.1.0 |Adenine nucleotide alpha hydrolase-like |Nucleotidylyl transferase |automated matches |automated matches |Borrelia burgdorferi [TaxId: 224326]
d1wima_ : (ASP55) (SER89) [view usage] : g.44.1.1 |RING/U-box |RING/U-box |RING finger domain, C3HC4 |UbcM4-interacting protein 4 (KIAA0161) |Human (Homo sapiens) [TaxId: 9606]
d3o3ga_ : (SER50) (ASN96) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |automated matches |Thermotoga maritima [TaxId: 2336]
d2zpua_ : (ASN244) (LEU286) [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |automated matches |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
d4pdwc_ : (LEU43) (ILE69) [view usage] : b.121.4.1 |Nucleoplasmin-like/VP (viral coat and capsid proteins) |Positive stranded ssRNA viruses |Picornaviridae-like VP (VP1, VP2, VP3 and VP4) |automated matches |Human rhinovirus 14 [TaxId: 12131]
d1e20a_ : (THR53) (TRP96) [view usage] : c.34.1.1 |Homo-oligomeric flavin-containing Cys decarboxylases, HFCD |Homo-oligomeric flavin-containing Cys decarboxylases, HFCD |Homo-oligomeric flavin-containing Cys decarboxylases, HFCD |4'-phosphopantothenoylcysteine decarboxylase (PPC decarboxylase, halotolerance protein Hal3a) |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1gq3a2 : (VAL218) (VAL248) [view usage] : c.78.1.1 |ATC-like |Aspartate/ornithine carbamoyltransferase |Aspartate/ornithine carbamoyltransferase |Aspartate carbamoyltransferase catalytic subunit |Escherichia coli [TaxId: 562]
d2do8a1 : (GLN138) (MET173) [view usage] : d.310.1.1 |VC0467-like |VC0467-like |VC0467-like |Hypothetical protein HD1794 |Haemophilus ducreyi [TaxId: 730]
d1fb1a_ : (HIS210) (SER250) [view usage] : d.96.1.1 |T-fold |Tetrahydrobiopterin biosynthesis enzymes-like |GTP cyclohydrolase I |GTP cyclohydrolase I |Human (Homo sapiens) [TaxId: 9606]
d1nbab_ : (GLY67) (PRO121) [view usage] : c.33.1.3 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |N-carbamoylsarcosine amidohydrolase |Arthrobacter sp. [TaxId: 1667]
d2gmia1 : (ASP81) (SER114) [view usage] : d.20.1.1 |UBC-like |UBC-like |UBC-related |Ubiquitin conjugating enzyme, UBC |Baker's yeast (Saccharomyces cerevisiae), ubc13 [TaxId: 4932]
d1ekeb_ : (THR45) (ASN101) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |Class II ribonuclease H (RNase HII) |Methanococcus jannaschii [TaxId: 2190]
d2a7la1 : (TYR85) (SER117) [view usage] : d.20.1.1 |UBC-like |UBC-like |UBC-related |Ubiquitin-protein ligase W (E2 W) |Human (Homo sapiens) [TaxId: 9606]
d1ni3a2 : (THR338) (GLY368) [view usage] : d.15.10.2 |beta-Grasp (ubiquitin-like) |TGS-like |G domain-linked domain |YchF GTP-binding protein, C-terminal domain |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
d1uaxa_ : (THR45) (LEU95) [view usage] : c.55.3.1 |Ribonuclease H-like motif |Ribonuclease H-like |Ribonuclease H |Class II ribonuclease H (RNase HII) |Pyrococcus horikoshii [TaxId: 53953]
d1yzya1 : (ASN150) (GLY189) [view usage] : c.146.1.1 |YgbK-like |YgbK-like |YgbK-like |Hypothetical protein HI1011 |Haemophilus influenzae [TaxId: 727]
d4koob_ : (SER143) (VAL175) [view usage] : d.18.1.2 |ssDNA-binding transcriptional regulator domain |ssDNA-binding transcriptional regulator domain |Plant transcriptional regulator PBF-2 |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1mvla_ : (THR53) (TRP96) [view usage] : c.34.1.1 |Homo-oligomeric flavin-containing Cys decarboxylases, HFCD |Homo-oligomeric flavin-containing Cys decarboxylases, HFCD |Homo-oligomeric flavin-containing Cys decarboxylases, HFCD |4'-phosphopantothenoylcysteine decarboxylase (PPC decarboxylase, halotolerance protein Hal3a) |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d2z15a1 : (TYR54) (LEU95) [view usage] : d.370.1.1 |BTG domain-like |BTG domain-like |BTG domain-like |TOB1, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
d1eg1a_ : (LEU302) (ALA350) [view usage] : b.29.1.10 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolase family 7 catalytic core |Cellobiohydrolase I (cellulase, Endoglucanase I, CBH1) |Trichoderma reesei, Endoglucanase I [TaxId: 51453]
d1yraa_ : (HIS112) (ARG146) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |ATP(GTP)-binding protein PAB0955 |Pyrococcus abyssi [TaxId: 29292]
d2gska_ : (ARG19) (ARG48) [view usage] : f.4.3.3 |Transmembrane beta-barrels |Porins |Ligand-gated protein channel |Outer membrane cobalamin transporter BtuB |Escherichia coli [TaxId: 562]
d1b0ja2 : (GLY182) (THR234) [view usage] : c.83.1.1 |Aconitase iron-sulfur domain |Aconitase iron-sulfur domain |Aconitase iron-sulfur domain |Aconitase A, N-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
d1wzva1 : (ASP79) (ASN112) [view usage] : d.20.1.1 |UBC-like |UBC-like |UBC-related |Ubiquitin conjugating enzyme, UBC |Human (Homo sapiens), E2 L6 [TaxId: 9606]
d3obua_ : (ASP104) (GLU138) [view usage] : d.20.1.2 |UBC-like |UBC-like |UEV domain |Tumor susceptibility gene 101 (TSG101) |Human (Homo sapiens) [TaxId: 9606]
d1kbpa2 : (GLU187) (ARG222) [view usage] : d.159.1.1 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |Purple acid phosphatase-like |Plant purple acid phosphatase, catalytic domain |French bean (Phaseolus vulgaris) [TaxId: 3885]
d1mvna_ : (THR53) (TRP96) [view usage] : c.34.1.1 |Homo-oligomeric flavin-containing Cys decarboxylases, HFCD |Homo-oligomeric flavin-containing Cys decarboxylases, HFCD |Homo-oligomeric flavin-containing Cys decarboxylases, HFCD |4'-phosphopantothenoylcysteine decarboxylase (PPC decarboxylase, halotolerance protein Hal3a) |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d3p9ha_ : (ASP104) (GLU138) [view usage] : d.20.1.2 |UBC-like |UBC-like |UEV domain |Tumor susceptibility gene 101 (TSG101) |Human (Homo sapiens) [TaxId: 9606]
d1uw5a_ : (PRO130) (PHE163) [view usage] : d.129.3.4 |TBP-like |Bet v1-like |Phoshatidylinositol transfer protein, PITP |Phoshatidylinositol transfer protein, PITP |Human (Homo sapiens) [TaxId: 9606]
d1kmpa_ : (ASN95) (ARG126) [view usage] : f.4.3.3 |Transmembrane beta-barrels |Porins |Ligand-gated protein channel |Outer membrane transporter FecA |Escherichia coli [TaxId: 562]
d2ek3a_ : (THR43) (PHE67) [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
d2btqa1 : (THR184) (PHE246) [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |Tubulin alpha-subunit |Prosthecobacter dejongeii [TaxId: 48465]
d3c96a2 : (SER222) (PHE266) [view usage] : d.16.1.2 |FAD-linked reductases, C-terminal domain |FAD-linked reductases, C-terminal domain |PHBH-like |Monooxygenase PhzS |Pseudomonas aeruginosa [TaxId: 287]
d3lf1a_ : (VAL157) (GLN223) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d2q7sb_ : (GLN231) (GLY288) [view usage] : c.56.5.9 |Phosphorylase/hydrolase-like |Zn-dependent exopeptidases |FGase-like |N-formylglutamate amidohydrolase |Ralstonia eutropha [TaxId: 106590]
d4nr3b_ : (ASP81) (ALA114) [view usage] : d.20.1.1 |UBC-like |UBC-like |UBC-related |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3l6ca_ : (LEU246) (LEU294) [view usage] : c.79.1.0 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1tela1 : (GLY1151) (GLY1193) [view usage] : c.1.14.1 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |RuBisCo, large subunit, C-terminal domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Chlorobium tepidum [TaxId: 1097]
d2yqga_ : (ASP37) (ILE62) [view usage] : b.1.6.0 |Immunoglobulin-like beta-sandwich |Cadherin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4l08a_ : (LEU46) (LEU93) [view usage] : c.33.1.0 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |automated matches |automated matches |Pseudomonas putida [TaxId: 1042876]
d1claa_ : (ARG18) (PHE70) [view usage] : c.43.1.1 |CoA-dependent acyltransferases |CoA-dependent acyltransferases |CAT-like |Chloramphenicol acetyltransferase, CAT |Escherichia coli [TaxId: 562]
d4l07a_ : (SER45) (LEU93) [view usage] : c.33.1.0 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |automated matches |automated matches |Pseudomonas putida [TaxId: 1042876]
d2elea_ : (THR43) (PHE67) [view usage] : c.90.1.1 |Tetrapyrrole methylase |Tetrapyrrole methylase |Tetrapyrrole methylase |Diphthine synthase, DphB |Pyrococcus horikoshii [TaxId: 53953]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.2, d.159, c.79, c.90, b.29, c.26, c.56, d.129, f.4, c.37, c.55, b.121, c.32, d.96, b.1, c.78, d.20, c.43, c.33,
c.34, d.15, d.16, c.83, g.44, d.18, c.146, d.310, d.370